The coding mitochondrial genome of crayfish Cambarellus patzcuarensis (Cambaridae, Decapoda) with phylogenetic analysis
文献类型: 外文期刊
第一作者: Peng, Chao
作者: Peng, Chao;Luo, Xianzhen;Chen, Gaojie;Xie, Linwen;Ye, Peirong;Fan, Sigang
作者机构:
关键词: Coding mitogenome; Cambarellus patzcuarensis; phylogeny; high-throughput sequencing
期刊名称:MITOCHONDRIAL DNA PART B-RESOURCES ( 影响因子:0.7; 五年影响因子:0.6 )
ISSN:
年卷期: 2025 年 10 卷 7 期
页码:
收录情况: SCI
摘要: Cambarellus patzcuarensis is a popular aquarium freshwater crayfish in China. In this study, the mitochondrial genome of C. patzcuarensis was sequenced using Illumina HiSeq. The coding mitogenome of C. patzcuarensis is 15,000 bp in length, consisting 13 protein-coding genes (PCGs), 22 transfer RNAs, and two ribosomal RNAs. The A + T content was 70.17%. Ten PCGs had ATN as the start codon. Three PCGs were stopped with incomplete stop codon. The phylogenetic analysis shown that C. patzcuarensis was grouped with other Procambarus species. These results are useful for understanding the phylogenetic relationships of Cambaridae crayfish.
分类号:
- 相关文献
作者其他论文 更多>>
-
Unravelling the pathogenesis of Vibrio parahaemolyticus infection: impacts on antioxidant and innate immunity gene responses in Scylla paramamosain
作者:Liu, Guangxin;Fan, Sigang;Ma, Hongling;Deng, Yiqin;Jiang, Jianjun;Cheng, Changhong;Feng, Juan;Guo, Zhixun;Lin, Li;Qin, Zhendong;Li, Ce
关键词:Scylla paramamosain; V. parahaemolyticus LG2206; Oxidative stress; Immune response; Tissue pathogenesis
-
Time- and concentration-dependent metabolic responses reveal adaptation failure in cadmium-exposed Haliotis diversicolor
作者:Lu, Jie;Yao, Tuo;Fu, Shengli;Fan, Sigang;Lu, Jie;Yao, Tuo;Yao, Tuo;Yao, Tuo;Ye, Lingtong
关键词:Haliotis diversicolor; Cd toxicity; Metabolomics; Allostatic overload; Time; and concentration-dependent effects
-
Comparison of methods to produce high-quality dried triploid Fujian oyster: Hot air drying emerges as a superior technique
作者:Li, Hongyan;Lu, Yuchen;Lu, Jie;Yao, Tuo;Fu, Shengli;Fan, Sigang;Li, Hongyan;Lu, Jie;Yao, Tuo;Ye, Lingtong
关键词:Triploid fujian oyster; Drying methods; Flavor compounds; Dual-analytical approach
-
Recent H9N2 avian influenza virus lost hemagglutination activity due to a K141N substitution in hemagglutinin
作者:Wen, Feng;Yan, Zhanfei;Chen, Gaojie;Chen, Yao;Wang, Nina;Li, Zhili;Guo, Jinyue;Liu, Quan;Huang, Shujian;Wen, Feng;Yu, Hai
关键词:avian influenza virus; hemagglutination activity; haemagglutinin; mutation; thermostability; surveillance; poultry
-
The complete mitochondrial genome of bamboo shrimp Atyopsis moluccensis (Atyidae, Decapoda)
作者:Peng, Chao;Fan, Sigang;Fan, Sigang
关键词:Mitochondrial genome; phylogeny; Atyopsis moluccensis; Atyidae
-
Transcriptome profiling of the gills to air exposure in mud crab Scylla paramamosain
作者:Fan, Sigang;Guo, Yihui;Cheng, Changhong;Huang, Xiaolin;Ma, Hongling;Guo, Zhixun;Liu, Guangxin;Gao, Yougen;Fan, Sigang;Huang, Xiaolin;Yang, Qibin;Fan, Sigang;Yang, Qibin;Gao, Yougen
关键词:Scylla paramamosain; Transcriptome; gill; air exposure
-
Genome-Wide Microsatellites in Acanthopagrus latus: Development, Distribution, Characterization, and Polymorphism
作者:Peng, Chao;Luo, Congqiang;Shao, Liye;Huang, Haihong;Xiang, Guangqing;Huang, Jiezhen;Fan, Sigang
关键词:genome-wide; microsatellite;
Acanthopagrus latus ; GO; KEGG