A Naked-Eye Visual Reverse Transcription Loop-Mediated Isothermal Amplification with Sharp Color Changes for Potential Pen-Side Test of Foot-and-Mouth Disease Virus

文献类型： 外文期刊

第一作者： Zhang, Jie

作者： Zhang, Jie;Zhang, Ziteng;Liu, Yongsheng;Zhang, Jie;Hou, Qian;Ma, Weimin;Chen, Danian;Zhang, Weibing;Wubshet, Ashenafi Kiros;Ding, Yaozhong;Li, Miaomiao;Li, Qian;Chen, Jiao;Dai, Junfei;Wu, Guohua;Wang, Yang;He, Jijun;Zaberezhny, Alexei D.;Pejsak, Zygmunt;Tarasiuk, Kazimierz;Khan, Muhammad Umar Zafar

作者机构：

关键词： foot-and-mouth disease virus; loop-mediated isothermal amplification; naked-eye visualization; pen-side test; 3D gene

期刊名称：VIRUSES-BASEL （ 影响因子：5.818； 五年影响因子：5.811 ）

ISSN：

年卷期： 2022 年 14 卷 9 期

页码：

收录情况： SCI

摘要： Visual loop-mediated isothermal amplification (LAMP) is qualified to be applied in the field to detect pathogens due to its simplicity, rapidity and cost saving. However, the color changes in currently reported visual reverse transcription LAMP (RT-LAMP) for foot-and-mouth disease virus (FMDV) detection are not so obvious to the naked eye, so interpretation of results is troublesome. In this study, a new naked-eye visual RT-LAMP to detect all seven distinct serotypes of FMDV was established based on the 3D genes by using pH-sensitive neutral red as the indicator, rendering a sharp contrast of color changes between the negative (light orange) and the positive (pink). Analytical sensitivity tests showed that the detection limit of the visual RT-LAMP was 10(4) copies/mu L while those were 10(3) and 10(4) copies/mu L for the RT-qPCR and conventional RT-PCR methods, respectively. Specificity tests proved that the established visual RT-LAMP assay had no cross-reactivity with other common livestock viruses. Furthermore, the analysis of 59 clinical samples showed 98.31% and 100% concordance with the RT-qPCR and the RT-PCR, respectively. The pan-serotypic FMD visual RT-LAMP assay could be suitable for a pen-side test of all seven serotypes of FMDV because the results could be easily distinguished by the naked eye without the requirement of complicated instruments and professional technicians. Hence, the novel method may have a promising prospect in field tests which exert an important role in monitoring, preventing, and controlling FMD, especially in regions with no PCR or qPCR instrument available.

分类号：

  • 相关文献
作者其他论文 更多>>

微信小程序