DEVELOPMENT AND CHARACTERIZATION OF 21 EST-DERIVED MICROSATELLITE MARKERS IN VICIA FABA (FAVA BEAN)

文献类型： 外文期刊

第一作者： Ma, Yu

作者： Ma, Yu;Yang, Tao;Guan, Jianping;Wang, Shumin;Wang, Haifei;Sun, Xuelian;Zong, Xuxiao

作者机构：

关键词： allele;expressed sequence tag;simple sequence repeat markers;primer pairs;genotype;heterozygosity;GenBank sequence data;genetic diversity;polymorphism;NCBI database;EMBL database;molecular breeding;GRAMENE website;SSRIT software

期刊名称：AMERICAN JOURNAL OF BOTANY （ 影响因子：3.844； 五年影响因子：3.657 ）

ISSN：

年卷期：

页码：

收录情况： SCI

摘要： Premise of the study: Expressed sequence tag (EST)-derived microsatellite simple sequence repeat (SSR) markers were developed in Vicia faba L. by screening the NCBI database. Markers were validated and explored for size polymorphism among fava bean accessions.Methods and Results: Twenty-one EST-SSR primer pairs were identified, and the loci characterized were size polymorphic among 32 fava bean genotypes from diverse geographical locations. The number of alleles (N-alpha) per locus ranged from 2 to 9, and expected heterozygosity (H-E) ranged from 0.0476 to 0.8304, respectively.Conclusions: These markers will be useful to study genetic diversity, genetic mapping, and molecular breeding in fava bean.

分类号： Q94

  • 相关文献

[1]GENERATION AND CHARACTERIZATION OF 11 NOVEL EST DERIVED MICROSATELLITES FROM VICIA FABA (FABACEAE). Gong, Ya-Ming,Xu, Sheng-Chun,Hu, Qi-Zan,Zhang, Gu-Wen,Ding, Ju,Mao, Wei-Hua,Li, Ze-Yun.

[2]Evaluation of genetic identity and variation in cultivars of Pyrus pyrifolia (Burm.f.) Nakai from China using microsatellite markers. Cao, Y.,Yang, J.,Zhang, S.,Cao, Y.,Tian, L.,Gao, Y..

[3]Genetic diversity of H9N2 influenza viruses from pigs in China: A potential threat to human health?. Yu, Hai,Zhou, Yan-Jun,Li, Guo-Xin,Ma, Ji-Hong,Yan, Li-Ping,Wang, Bin,Yang, Fu-Ru,Huang, Meng,Tong, Guang-Zhi.

[4]Genetic Diversity and Genotype Analysis of Duck Circovirus. Fu, Guanghua,Shi, Shaohua,Huang, Yu,Cheng, Longfei,Peng, Chunxiang,Wan, Chunhe,Chen, Hongmei,Lin, Fang,Lin, Jiansheng,Fu, Guanghua,Shi, Shaohua,Huang, Yu,Cheng, Longfei,Wan, Chunhe,Chen, Hongmei,Lin, Fang,Lin, Jiansheng.

[5]A Simple Sequence Repeat Marker Linked to the Susceptibility of Apple to Alternaria Blotch Caused by Alternaria alternata Apple Pathotype. Zhang, Liyi,Cong, Peihua,Li, Ying,Zhang, Zhen,Cheng, Zong-Ming,Cheng, Zong-Ming.

[6]Identification and Characterization of a Multigene Family Encoding Germin-Like Proteins in Cultivated Peanut (Arachis hypogaea L.). Guo, Baozhu,Holbrook, Corley,Wang, Ming Li,Chen, Xiaoping,Liang, Xuanqiang,Chen, Xiaoping,Culbreath, Albert,Brenneman, Tim.

[7]Isolation and characterization of 40 microsatellite loci for oriental river prawn (Macrobrachium nipponense) and cross-species utility. Fu, Hongtuo,Wu, Yan,Gong, Yongsheng,Jiang, Sufei,Xiong, Yiwei,Qiao, Hui,Li, Fajun,Fu, Hongtuo,Wang, Ning.

[8]Taxonomic status and genetic diversity of cultured largemouth bass Micropterus salmoides in China. Bai, Junjie,Quan, Yingchun,Liang, Suxian,Lutz-Carrillo, Dijar J.,Liang, Suxian.

[9]Sequence characterized amplified regions (SCAR) reveal candidate markers linked to growth traits in the Chinese shrimp Fenneropenaeus chinensis. He, Yu-Ying,Liu, Ping,Li, Jian,Wang, Qing-Yin,He, Yu-Ying.

[10]DNA fingerprinting of kiwifruit (Actinidia spp.) genotypes using fluorescent amplified fragment length polymorphism. Xu, X. B.,Chen, H.,Yi, G. J.,Zhang, Q. M.. 2007

[11]Improvement of combining ability for restorer lines with the identified SSR markers in hybrid rice breeding. Liu, XC,Chen, SG,Chen, JS,Ishiki, KS,Wang, WX,Yu, LQ.

[12]Polymorphic microsatellite markers in the guava fruit fly, Bactrocera correcta (Diptera: Tephritidae). Buahom, Nopparat,Li, Zhihong,Du, Yu,Jiang, Xiaolong,Wu, Yi,Deng, Yuliang,Fu, Wei.

[13]Genetic diversity of melon landraces (Cucumis melo L.) in the Xinjiang Uygur Autonomous Region on the basis of simple sequence repeat markers. Zhang, Yongbing,Aierken, Yasheng,Ma, Xinli,Yi, Hongping,Wu, Mingzhu,Fan, Xiangbin.

[14]Genetic Diversity Analysis of Faba Bean (Vicia faba L.) Based on EST-SSR Markers. Gong Ya-ming,Xu Sheng-chun,Hu Qi-zan,Zhang Gu-wen,Ding Ju,Mao Wei-hua,Li Ze-yun. 2011

[15]Genetic diversity and differentiation of Ankole cattle populations in Uganda inferred from microsatellite data. Kugonza, D. R.,Mpairwe, D.,Kiwuwa, G. H.,Kugonza, D. R.,Jianlin, H.,Okeyo, A. M.,Hanotte, O.,Jianlin, H.,Nabasirye, M..

[16]DEVELOPMENT OF MICROSATELLITE MARKERS IN KMERIA SEPTENTRIONALIS (MAGNOLIACEAE), AN ENDANGERED CHINESE TREE. Lin, Yanfang,Zhang, Qiwei,Wang, Yaofang,Tang, Shaoqing,Lin, Yanfang,Tang, Shaoqing,Zeng, Liyan.

[17]Genetic dissection of a chromosomal region conferring hybrid sterility using multi-donors from Oryza glaberrima. Zhou, Jiawu,Zhao, Zhigang,Jiang, Ling,Wan, Jianmin,Zhou, Jiawu,Xu, Peng,Deng, Xianneng,Li, Jing,Hu, Fengyi,Deng, Wei,Tao, Dayun,Ren, Guangyun,Zhang, Zhi,Luan, Yahong.

[18]Identification and characterization of microsatellite markers from Musa balbisiana. Feng, Su-ping,Wu, Yao-ting,Wang, Jing-yi,Wang, Jing-yi,Huang, Bing-zhi,Chen, Ye-yuan.

[19]Development and characterization of 12 microsatellite markers for Johnius belengerii. Ma, Chunyan,Ma, Hongyu,Ma, Lingbo,Shen, Anglv,Gao, Lujiao.

[20]Polymorphic microsatellite differences among four cultured populations of two selected tilapia strains. Li, Dayu,Yang, Hong,Zou, Zhiying,Xiao, Wei,Zhu, Jingling,Luo, Yongju.

作者其他论文 更多>>

微信小程序