Recent advances in proteomics and metabolomics in plants

文献类型： 外文期刊

第一作者： Yan, Shijuan

作者： Yan, Shijuan;Yin, Zhibin;Bhawal, Ruchika;Zhang, Sheng;Thannhauser, Theodore W.

作者机构：

关键词： LC-MS; GC-MS; Single cell proteomics; Phosphoproteomics; Tandem mass tag; Fluxomics; Spatially resolved metabolomics; Mass spectrometry imaging

期刊名称：MOLECULAR HORTICULTURE （ 影响因子：8.1； 五年影响因子：11.0 ）

ISSN： 2730-9401

年卷期： 2022 年 2 卷 1 期

页码：

收录情况： SCI

摘要： Over the past decade, systems biology and plant-omics have increasingly become the main stream in plant biology research. New developments in mass spectrometry and bioinformatics tools, and methodological schema to integrate multi-omics data have leveraged recent advances in proteomics and metabolomics. These progresses are driving a rapid evolution in the field of plant research, greatly facilitating our understanding of the mechanistic aspects of plant metabolisms and the interactions of plants with their external environment. Here, we review the recent progresses in MS-based proteomics and metabolomics tools and workflows with a special focus on their applications to plant biology research using several case studies related to mechanistic understanding of stress response, gene/protein function characterization, metabolic and signaling pathways exploration, and natural product discovery. We also present a projection concerning future perspectives in MS-based proteomics and metabolomics development including their applications to and challenges for system biology. This review is intended to provide readers with an overview of how advanced MS technology, and integrated application of proteomics and metabolomics can be used to advance plant system biology research.

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