The haplotype-resolved T2T reference genome highlights structural variation underlying agronomic traits of melon
文献类型： 外文期刊
第一作者： Li, Guoli
作者： Li, Guoli;Tang, Lingli;He, Yuhua;Xu, Yongyang;Zhao, Guangwei;Li, Guoli;Lin, Tao;Tang, Lingli;He, Yuhua;Xu, Yongyang;Zhao, Guangwei;Tang, Lingli;Zhao, Guangwei;Bendahmane, Abdelhafid;Garcia-Mas, Jordi;Garcia-Mas, Jordi
作者机构：
期刊名称：HORTICULTURE RESEARCH （ 影响因子：8.7； 五年影响因子：9.0 ）
ISSN： 2662-6810
年卷期： 2023 年 10 卷 10 期
页码：
收录情况： SCI
摘要： Melon (Cucumis melo L.) is an important vegetable crop that has an extensive history of cultivation. However, the genome of wild and semi-wild melon types that can be used for the analysis of agronomic traits is not yet available. Here we report a chromosome-level T2T genome assembly for 821 (C. melo ssp. agrestis var. acidulus), a semi-wild melon with two haplotypes of similar to 373 Mb and similar to 364 Mb, respectively. Comparative genome analysis discovered a significant number of structural variants (SVs) between melo (C. melo ssp. melo) and agrestis (C. melo ssp. agrestis) genomes, including a copy number variation located in the ToLCNDV resistance locus on chromosome 11. Genome-wide association studies detected a significant signal associated with climacteric ripening and identified one candidate gene CM_ac12g14720.1 (CmABA2), encoding a cytoplasmic short chain dehydrogenase/reductase, which controls the biosynthesis of abscisic acid. This study provides valuable genetic resources for future research on melon breeding.
分类号：
- 相关文献
作者其他论文 更多>>
-
Deficit irrigation combined with a high planting density optimizes root and soil water-nitrogen distribution to enhance cotton productivity in arid regions
作者：Wu, Fengquan;Tang, Qiuxiang;Wu, Fengquan;Cui, Jianping;Tian, Liwen;Guo, Rensong;Wang, Liang;Zheng, Zipiao;Zhang, Na;Lin, Tao;Zhang, Yanjun
关键词：Root system; Soil water; Soil nitrate nitrogen; Water productivity
-
Traceability Research on Geographic Erigeron breviscapus Based on High-Resolution Mass Spectrometry and Chemometric Analysis
作者：Zhang, Jiao;Tian, Heng;Lin, Tao;Liu, Hongcheng;Zhang, Jiao;Huang, Xiangzhong;Tian, Heng;Tian, Heng
关键词：Erigeron breviscapus; geographic origin; chemometric analysis
-
Visible-light-driven water-soluble zinc oxide quantum dots for efficient control of citrus canker
作者：Rao, Wenhua;Yue, Qi;Gao, Shang;Lei, Meiling;Lin, Tao;Hu, Jinfeng;Fan, Guocheng;Rao, Wenhua;Lin, Tao;Hu, Jinfeng;Fan, Guocheng;Yue, Qi;Gao, Shang;Lei, Meiling;Pan, Xiaohong
关键词：ZnO quantum dots; citrus canker; antibacterial mechanism; reactive oxygen species; nanopesticides
-
Assessing the Severity of Verticillium Wilt in Cotton Fields and Constructing Pesticide Application Prescription Maps Using Unmanned Aerial Vehicle (UAV) Multispectral Images
作者：Li, Xiaojuan;Liang, Zhi;Yang, Guang;Liu, Bo;Lin, Tao
关键词：cotton Verticillium wilt; unmanned aerial vehicle (UAV) remote sensing; monitoring model; precision spraying; prescription map
-
The genomic route to tomato breeding: Past, present, and future
作者：Wang, Yan;Lin, Tao;Sun, Chuanlong;Li, Chuanyou;Sun, Chuanlong;Ye, Zhibiao;Li, Chuanyou;Huang, Sanwen;Huang, Sanwen
关键词：
-
Quantification of caffeine and catechins and evaluation of bitterness and astringency of Pu-erh ripen tea based on portable near-infrared spectroscopy
作者：Wu, Zhongdong;Li, Chenghuan;Yi, Lunzhao;Ren, Dabing;Gu, Ying;Wang, Shuo;Liu, Hongcheng;Lin, Tao
关键词：Near-infrared spectroscopy; Pu-erh ripen tea; Caffeine; Catechins; Bitterness; Astringency
-
Genetic potential and inheritance pattern of agronomic traits in faba bean under free and infested Orobanche soil conditions
作者：Soliman, Alaa A.;Ibrahim, Mohamed A.;Mousa, Manar I.;Soliman, Alaa A.;He, Yuhua;Yu, Haitian;Mansour, Elsayed
关键词：Biotic stress; Breeding; Combining ability; Faba bean; GGE biplot; Heterosis; linextester; Orobanche
