Identification of long noncoding RNAs reveals the effects of dinotefuran on the brain in Apis mellifera (Hymenopptera: Apidae)
文献类型: 外文期刊
第一作者: Huang, Minjie
作者: Huang, Minjie;Dong, Jie;Xiao, Minghui;Wang, Deqian;Guo, Haikun;Xiao, Minghui
作者机构:
关键词: lncRNA; Dinotefuran; Brain; Apis mellifera; Neonicotinoid insecticide
期刊名称:BMC GENOMICS ( 影响因子:3.969; 五年影响因子:4.478 )
ISSN: 1471-2164
年卷期: 2021 年 22 卷 1 期
页码:
收录情况: SCI
摘要: BackgroundDinotefuran (CAS No. 165252-70-0), a neonicotinoid insecticide, has been used to protect various crops against invertebrate pests and has been associated with numerous negative sublethal effects on honey bees. Long noncoding RNAs (lncRNAs) play important roles in mediating various biological and pathological processes, involving transcriptional and gene regulation. The effects of dinotefuran on lncRNA expression and lncRNA function in the honey bee brain are still obscure.ResultsThrough RNA sequencing, a comprehensive analysis of lncRNAs and mRNAs was performed following exposure to 0.01mg/L dinotefuran for 1, 5, and 10 d. In total, 312 lncRNAs and 1341 mRNAs, 347 lncRNAs and 1458 mRNAs, and 345 lncRNAs and 1155 mRNAs were found to be differentially expressed (DE) on days 1, 5 and 10, respectively. Gene set enrichment analysis (GSEA) indicated that the dinotefuran-treated group showed enrichment in carbohydrate and protein metabolism and immune-inflammatory responses such as glycine, serine and threonine metabolism, pentose and glucuronate interconversion, and Hippo and transforming growth factor-beta (TGF-beta) signaling pathways. Moreover, the DE lncRNA TCONS_00086519 was shown by fluorescence in situ hybridization (FISH) to be distributed mainly in the cytoplasm, suggesting that it may serve as a competing endogenous RNA and a regulatory factor in the immune response to dinotefuran.ConclusionThis study characterized the expression profile of lncRNAs upon exposure to neonicotinoid insecticides in young adult honey bees and provided a framework for further study of the role of lncRNAs in honey bee growth and the immune response.
分类号:
- 相关文献
作者其他论文 更多>>
-
Novel Insights into the Circadian Rhythms Based on Long Noncoding and Circular RNA Profiling
作者:Tan, Xiaodong;Zhang, Jiawen;Dong, Jie;Huang, Minjie;Zhou, Zhenzhen;Wang, Deqian
关键词:circadian rhythm; long noncoding RNA; circular RNA; hypothalamus; AOX1
-
Molecular characterization and expression pattern of Rubisco activase gene GhRCAβ2 in upland cotton (Gossypium hirsutum L.)
作者:Chao, Maoni;Huang, Ling;Hu, Genhai;Zhang, Qiufang;Zhang, Jinbao;Wang, Qinglian;Dong, Jie;Chen, Yu
关键词:Photosynthesis; RCA; Carbon assimilation; Gene expression; Upland cotton
-
The GmSTF1/2-GmBBX4 negative feedback loop acts downstream of blue-light photoreceptors to regulate isoflavonoid biosynthesis in soybean
作者:Song, Zhaoqing;Zhao, Fengyue;Chu, Li;Lin, Huan;Xiao, Yuntao;Fang, Zheng;Yu, Deyue;Gai, Junyi;Xu, Dongqing;Wang, Xuncheng;Dong, Jie;Lyu, Xiangguang;Liu, Bin
关键词:photoreceptor; light signaling; isoflavonoid; GmSTF; GmBBX4; soybean
-
New Insights into Identification, Distribution, and Health Benefits of Polyamines and Their Derivatives
作者:Qiao, Jiangtao;Cai, Wenwen;Wang, Kai;Dong, Jie;Xu, Xiang;Qiao, Jiangtao;Wang, Kai;Haubruge, Eric;Cai, Wenwen;Dong, Jie;Zhang, Hongcheng;El-Seedi, Hesham R.;El-Seedi, Hesham R.;El-Seedi, Hesham R.
关键词:conjugated polyamines; spermidine; functionalproperties; nutraceuticals
-
Whole-genome variants dataset of 209 local chickens from China
作者:Tan, Xiaodong;Zhang, Jiawen;Dong, Jie;Huang, Minjie;Zhou, Zhenzhen;Yang, Shuyuan;Wang, Deqian;Li, Qinghai;Wang, Huanhuan;Bai, Lijuan;Cui, Ming
关键词:
-
Uncovering hidden dangers: The combined toxicity of abamectin and lambda-cyhalothrin on honey bees
作者:Chen, Xiaozhen;Chen, Xiaozhen;Wang, Feidi;Guo, Haikun;Liu, Xinju;Wu, Shenggan;Lv, Lu;Tang, Tao;Lv, Lu;Tang, Tao
关键词:Honey bees; Insecticides; Combined toxicity; Gut microbiota; Immune system; Detoxification
-
Genome-wide detections for runs of homozygosity and selective signatures reveal novel candidate genes under domestication in chickens
作者:Tan, Xiaodong;Dong, Jie;Huang, Minjie;Zhang, Jiawen;Zhou, Zhenzhen;Wang, Deqian;Liu, Lu;Li, Weifen;Liu, Lu;Xiang, Yun;Li, Qinghai;Wang, Huanhuan;Bai, Lijuan;Cui, Ming;Wu, De
关键词:Indigenous chickens; Genomic inbreeding; Runs of homozygosity; Selective signature; Transcriptome; VSTM2A