Identification and characterization of microRNA396 and its targets in Cucumis metuliferus infected with Meloidogyne incognita
文献类型: 外文期刊
第一作者: Ye, Deyou
作者: Ye, Deyou;Duan, Yanqiao;Qi, Yonghong;Cao, Sufang;Huynh, Bao-Lam
作者机构:
关键词: Identification; Characterization; microRNA396; Targets; Cucumis metuliferus; Meloidogyne incognita
期刊名称:SOUTH AFRICAN JOURNAL OF BOTANY ( 影响因子:3.1; 五年影响因子:3.1 )
ISSN: 0254-6299
年卷期: 2024 年 165 卷
页码:
收录情况: SCI
摘要: MicroRNAs (miRNAs), a class of non -coding small RNAs, play an important role in biotic and abiotic stresses. Previously, great progress has been made in miRNA-guided gene regulation in plant -parasitic cyst nematodes interactions. However, little is known about miRNAs regulation of nematode stress response in Cucumis metuliferus, which is a relative of cultivated cucumber or melon and highly resistant to the root -knot nematode Meloidogyne incognita. On the basis of our investigation recently, five cmu-miR396 precursors were firstly identified and characterized from C. metuliferus in this study. Subquently, a total of 12 genes were predicted to be as the potential targets of cmu-miR396 and their function involved in transcription factor, metabolism, signal transduction and stress response. Moreover, three cmu-GRFs genes with significant differential expression in roots of C. metuliferus were successfully amplified and confirmed by RT-PCR experimently. Additionally, the analysis was performed for the phylogeny and subcellular localization of cmu-GRFs protein, and the three transcription factors cmu-GRFs were confirmed as the candidate targets of cmumiR396 through 50RLM-RACE assays. These data laid a foundation for further functional analyses to reveal the roles played by miR396 during the interaction between C. metuliferus and M. incognita, leading to a better understanding of the mechanisms and underlying regulatory networks of miR396-mediated resistance to M. incognita in C. metuliferus. (c) 2024 SAAB. Published by Elsevier B.V. All rights reserved.
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