Rapid and Sensitive Diagnosis of Leber Hereditary Optic Neuropathy Variants Using Detection
文献类型: 外文期刊
第一作者: Wan, Xiaoling
作者: Wan, Xiaoling;Chen, Jieqiong;Wu, Yidong;Chen, Zhixuan;Li, Tong;Sun, Junran;Zhang, Ting;Wang, Xinjie;Sun, Xiaodong;Wan, Xiaoling;Chen, Jieqiong;Wu, Yidong;Chen, Zhixuan;Liu, Yin;Li, Tong;Sun, Junran;Wang, Xinjie;Sun, Xiaodong;Wan, Xiaoling;Chen, Jieqiong;Wu, Yidong;Chen, Zhixuan;Liu, Yin;Li, Tong;Sun, Junran;Zhang, Ting;Li, Yang;Sun, Xiaodong;Liu, Yin;Zhou, Fuling;Li, Yang;Li, Tong;Sun, Junran;Zhang, Ting;Li, Yang;Sun, Xiaodong;Wang, Xinjie;Sun, Xiaodong
作者机构:
期刊名称:JOURNAL OF MOLECULAR DIAGNOSTICS ( 影响因子:4.1; 五年影响因子:4.9 )
ISSN: 1525-1578
年卷期: 2023 年 25 卷 8 期
页码:
收录情况: SCI
摘要: Leber hereditary optic neuropathy (LHON) is the most common maternally inherited mitochondrial disease, with >90% of cases harboring one of three point variants (m.3460G>A, m.11778G>A, and m.14484T>C). Rapid and sensitive diagnosis of LHON variants is urgently needed for early diagnosis and timely treatment after onset, which is currently limited. Herein, we adapted the Cas12a-based DNA detection platform for LHON mitochondrial variant diagnosis. Single-strand guide CRISPR RNAs and enzymatic recombinase amplification primers were first screened, the CRISPR/Cas12a system was then optimized with restriction enzymes, and finally compared with Sanger sequencing and next -generation sequencing (NGS) in multicenter clinical samples. This approach can be completed within 30 minutes using only one drop of blood and could reach a sensitivity of 1% of heteroplasmy. Among the 182 multicenter clinical samples, the CRISPR/Cas12a detection system showed high consistency with Sanger sequencing and NGS in both specificity and sensitivity. Notably, a sample harboring a de novo 3.78% m.11778G>A variant detected by NGS, but not by Sanger sequencing, was successfully confirmed using the CRISPR/Cas12a assay, which proved the effectiveness of our method. Overall, our CRISPR/Cas12a detection system provides an alternative for rapid, convenient, and sensitive detection of LHON variants, exhibiting great potential for clinical practice. (J Mol Diagn 2023
分类号:
- 相关文献
作者其他论文 更多>>
-
Analysis of metagenome and metabolome disclosed the mechanisms of Dendrobium officinale polysaccharide on DSS-induced ulcerative colitis-affected mice
作者:Zeng, Xiaona;Tang, Shengqiu;Dong, Xiaoying;Zeng, Xiaona;Dong, Mengyue;Shao, Runlin;Liu, Ruiheng;Li, Tong;Zhang, Xinheng;Xie, Qingmei;Zeng, Xiaona;Dong, Mengyue;Shao, Runlin;Liu, Ruiheng;Li, Tong;Zhang, Xinheng;Xie, Qingmei;Zeng, Xiaona;Tang, Shengqiu;Dong, Xiaoying;Zeng, Xiaona;Dong, Mengyue;Shao, Runlin;Liu, Ruiheng;Li, Tong;Zhang, Xinheng;Xie, Qingmei;Zeng, Xiaona;Dong, Mengyue;Shao, Runlin;Liu, Ruiheng;Li, Tong;Zhang, Xinheng;Xie, Qingmei;Wong, Yung Hou;Wong, Yung Hou
关键词:Dendrobium officinale polysaccharide; Ulcerative colitis (UC); Metagenome; Metabolome
-
Water-fertilizer regulation drives microorganisms to promote iron, nitrogen and manganese cycling: A solution for arsenic and cadmium pollution in paddy soils
作者:Zhang, Ting;Sun, Yifei;Zhang, Nan;Shan, Hong;Zeng, Xibai;Su, Shiming;Zhang, Ting;Colinet, Gilles;Parikh, Sanjai J.;Garland, Gina;Huo, Lijuan
关键词:Arsenic; Cadmium; Water regime; Fertilizer regime; Microbial process
-
GLK transcription factors accompany ELONGATED HYPOCOTYL5 to orchestrate light-induced seedling development in Arabidopsis
作者:Zhang, Ting;Zhang, Rui;Zeng, Xi-Yu;Ye, Lu-Huan;Zhu, Xin-Guang;Wang, Peng;Zhang, Ting;Zeng, Xi-Yu;Tian, Shi-Long;Zhang, Rui;Ye, Lu-Huan;Zhu, Xin-Guang;Wang, Peng;Lee, Sanghwa;Busch, Wolfgang;Zhang, Yi-Jing;Zhou, Wen-Bin
关键词:
-
Integrated analysis of physiological, transcriptome, and metabolome analyses of the gills in Solenaia oleivora under ammonia exposure
作者:Zhang, Ting;Wen, Haibo;Xu, Dongpo;Zhang, Ting;Zhou, Yanfeng;Xu, Dongpo;Wen, Haibo;Ma, Xueyan
关键词:Mollusk; Ammonia; Transcriptome; Metabolome; Immune
-
Chiral Nanoclusters as Alternative Therapeutic Strategies to Confront the Health Threat from Antibiotic-Resistant Pathogens
作者:Wang, Zhe;Tian, Yijin;Hao, Jinghua;Liu, Ya;Tang, Jie;Liu, Yin;Zhu, Nali;Li, Zhigang;Li, Lingxiangyu;Wang, Zhe;Tian, Yijin;Hao, Jinghua;Tang, Jie;Hu, Ligang;Wang, Yawei;Jiang, Guibin;Wang, Zhe;Tian, Yijin;Hao, Jinghua;Tang, Jie;Xu, Zhenlan;Tang, Biao;Huang, Xiu;Huang, Xiu
关键词:Antibacterial activity; chiral silver nanoclusters; antimicrobial resistance; cytocompatibility; Pseudomonas aeruginosa
-
Translatome and Transcriptome Analyses Reveal the Mechanism that Underlies the Enhancement of Salt Stress by the Small Peptide Ospep5 in Plants
作者:Wang, Jinyan;Li, Yang;Li, Mingyue;Zhang, Wenting;Ling, Xitie;Chen, Tianzi;Guo, Dongshu;Yang, Yuwen;Liu, Qing;Zhang, Baolong;Wang, Jinyan;Li, Yang;Li, Mingyue;Zhang, Wenting;Ling, Xitie;Chen, Tianzi;Guo, Dongshu;Yang, Yuwen;Liu, Qing;Zhang, Baolong;Wang, Jinyan;Chen, Tianzi;Guo, Dongshu;Yang, Yuwen;Liu, Qing;Zhang, Baolong;Zheng, Zhongbing;Zhang, Baolong;Liu, Qing;Lu, Yaping;Hua, Kai
关键词:translatome; transcriptome; peptidome; small peptides; rice salt tolerance
-
PbrCSP1, a pollen tube-specific cold shock domain protein, is essential for the growth and cold resistance of pear pollen tubes
作者:Zhu, Xiaoxuan;Tang, Chao;Zhang, Ting;Zhang, Shaoling;Wu, Juyou;Wang, Peng;Zhu, Xiaoxuan;Tang, Chao;Wu, Juyou;Wu, Juyou
关键词:Pear; Pollen tube; Cold stress; Cold shock domain