Development, characterization, and variability analysis of microsatellites from a commercial cultivar of Musa acuminata

文献类型: 外文期刊

第一作者: Wu, Y. T.

作者: Wu, Y. T.;Wang, J. Y.;Zheng, L. S.;Liu, W. L.;Huang, B. Z.

作者机构:

关键词: Banana;Cross-species/genera transferability;Genetic diversity;Musa acuminata;Selectively amplified microsatellite analysis;Simple sequence repeat

期刊名称:GENETIC RESOURCES AND CROP EVOLUTION ( 影响因子:1.524; 五年影响因子:1.713 )

ISSN:

年卷期:

页码:

收录情况: SCI

摘要: We report the sequence and variability parameters of 23 microsatellite primers obtained from a commercial cultivar Gongjiao (Musa acuminata) using selectively amplified microsatellite (SAM) analysis. Polymorphisms were evaluated in a collection of 26 banana cultivars and 11 related species/subspecies. The mean number of alleles amplified per primer was 4.55 (range, 2-9), with a total of 100 alleles identified. The mean PIC value was 0.48 (range, 0.10-0.74). In addition, 22 markers also showed robust cross-species/genera amplification across 11 related species/subspecies, with the exception of Xiangtuijiao' (Ensete glaucum). Unweighted pair-grouping method with arithmetic averages (UPGMA) cluster analysis divided all the banana accessions into three main groups. The results demonstrate the usefulness of microsatellites for identification, similarity studies, and germplasm conservation in banana and related species.

分类号: S18

  • 相关文献

[1]Development and use of EST-SSR markers for assessing genetic diversity in the brown planthopper (Nilaparvata lugens Stal). Jing, S.,Liu, B.,Peng, L.,Peng, X.,Zhu, L.,He, G.,Fu, Q.. 2012

[2]Molecular diversity and genetic structure of 380 sweetpotato accessions as revealed by SSR markers. Yang Xin-sun,Liu Qing-chang,Yang Xin-sun,Su Wen-jin,Wang Lian-jun,Lei Jian,Chai Sha-sha. 2015

[3]Genetic diversity and population structure of vegetable soybean (Glycine max (L.) Merr.) in China as revealed by SSR markers. Dong, Dekun,Fu, Xujun,Yuan, Fengjie,Zhu, Shenlong,Li, Baiquan,Yang, Qinghua,Yu, Xiaomin,Zhu, Danhua,Chen, Pengyin. 2014

[4]Screening of highly informative and representative microsatellite markers for genotyping of major cultivated cotton varieties. M. Kuang,,W.H. Yang,F. Wang,H.X. Xu,Y.Q. Wang,D.Y. Zhou,D. Fang,L. Ma,X.A. Feng. 2014

[5]Genetic diversity and relationship analysis of Gossypium arboreum accessions. F. Liu,Z.L. Zhou,C.Y. Wang,Y.H Wang,X.Y. Cai,X.X. Wang,Z.S. Zhang,K.B. Wang. 2015

[6]Evaluation of Population Structure, Genetic Diversity and Origin of Northeast Asia Weedy Rice Based on Simple Sequence Repeat Markers. Li Mao-bai,Wang Hui,Cao Li-ming,Li Mao-bai. 2015

[7]Genetic diversity and elite gene introgression reveal the japonica rice breeding in northern China. Liu Dan,Wang Jia-yu,Wang Xiao-xue,Yang Xian-li,Sun Jian,Chen Wen-fu,Liu Dan. 2015

[8]Analysis of genetic diversity and population structure of peanut cultivars and breeding lines from China, India and the US using simple sequence repeat markers. Wang, Hui,Xie, Lianhui,Wang, Hui,Khera, Pawan,Culbreath, Albert K.,Wang, Hui,Guo, Baozhu,Wang, Hui,Yuan, Mei,Khera, Pawan,Varshney, Rajeev K.,Huang, Bingyan,Zhang, Xinyou,Katam, Ramesh,Zhuang, Weijian,Harris-Shultz, Karen,Moore, Kim M.. 2016

[9]Genetic differentiation and diversity of Callosobruchus chinensis collections from China. Duan, C. X.,Zhu, Z. D.,Li, D. D.,Sun, S. L.,Wang, X. M.,Li, W. C..

[10]Genetic Diversity of European and Chinese Oilseed Brassica rapa Cultivars from Different Breeding Periods. Zhao Yong-guo,Lu Chang-ming,Zhao Yong-guo,Zhao Yong-guo,Atta, Ofori. 2009

[11]RAPD analysis of 33 varieties of banana. Su, J,Zhou, P,Zheng, XQ,Huang, BZ,Li, FN. 2001

[12]Assessment of genetic diversity among the major Myanmar banana landraces. Wan, YS,Watanabe, JA,Yi, SS,Htaik, T,Win, K,Yamanaka, S,Nakamura, I,Watanabe, KN. 2005

[13]Development, characterization, genetic diversity and cross-species/genera transferability of ILP markers in rubber tree (Hevea brasiliensis). Li, Dejun,Deng, Zhi,Xia, Zhihui,Liu, Xianghong,Feng, Fuying.

[14]Molecular cloning and expression of four phenylalanine ammonia lyase genes from banana interacting with Fusarium oxysporum. Wang, Z.,Jia, C. -H.,Li, J. -P.,Xu, B. -Y.,Jin, Z. -Q.,Li, J. -Y.,Jin, Z. -Q..

[15]Banana MaEF1A facilitates plant growth and development. Liu, J. -H.,Li, Y. -C.,Zhang, J.,Zhang, N.,Xu, B. -Y.,Jin, Z. -Q.,Liu, J. -H.,Li, Y. -C.,Zhang, J.,Zhang, N.,Xu, B. -Y.,Jin, Z. -Q.,Wang, A. -B.,Jin, Z. -Q.,Gao, P. -Z..

[16]Construction of a high-density linkage map and mapping quantitative trait loci for somatic embryogenesis using leaf petioles as explants in upland cotton (Gossypium hirsutum L.). Zhenzhen Xu,Chaojun Zhang,Xiaoyang Ge,Ni Wang,Kehai Zhou,Xiaojie Yang,Zhixia Wu,Xueyan Zhang,Chuanliang Liu,Zuoren Yang,Changfeng Li,Kun Liu,Zhaoen Yang,Yuyuan Qian,Fuguang Li.

[17]Constructing a high-density linkage map for Gossypium hirsutum x Gossypium barbadense and identifying QTLs for lint percentage. Yuzhen Shi,Wentan Li,Aiguo Li,Ruihua Ge,Baocai Zhang,Junzhi Li,Guangping Liu,Junwen Li,Aiying Liu,Haihong Shang,Juwu Gong,Wankui Gong,Zemao Yang,Feiyü Tang,Zhi Liu,Weiping Zhu,Jianxiong Jiang,Xiaonan Yu,Tao Wang,Wei Wang,Tingting Chen,Kunbo Wang,Zhengsheng Zhang,Youlu Yuan. 2015

[18]Microsatellite Enrichment by Magnetic Beads in Chrysanthemum. Li, Y. H.,Luo, C.,Wu, Z. Y.,Zhang, X. H.,Cheng, X.,Huang, C. L.,Li, Y. H.,Dong, R.. 2013

[19]Molecular characterization of Fusarium head blight resistance from wheat variety Wangshuibai. Zhang, X,Zhou, MP,Ren, LJ,Bai, GH,Ma, HX,Scholten, OE,Guo, PG,Lu, WZ. 2004

[20]Mapping of a wheat resistance gene to yellow mosaic disease by amplified fragment length polymorphism and simple sequence repeat markers. Nie, H,He, ZT,Chen, XL,Han, YP,Wang, JR,Li, X,Han, CG,Yu, JL. 2005

作者其他论文 更多>>