Exploring the regulatory role of non-coding RNAs in fiber development and direct regulation of GhKCR2 in the fatty acid metabolic pathway in upland cotton
文献类型： 外文期刊
第一作者： Wang, Jingjing
作者： Wang, Jingjing;Wang, Xiaoyang;Nazir, Mian Faisal;Fu, Guoyong;Peng, Zhen;Chen, Baojun;Xing, Aishuang;Zhu, Mengchen;Ma, Xinli;Wang, Xiuxiu;Jia, Yinhua;Pan, Zhaoe;Wang, Liru;Xia, Yingying;He, Shoupu;Du, Xiongming;Wang, Jingjing;Wang, Xiaoyang;Nazir, Mian Faisal;Fu, Guoyong;Peng, Zhen;Chen, Baojun;Xing, Aishuang;Zhu, Mengchen;Ma, Xinli;Wang, Xiuxiu;Jia, Yinhua;He, Shoupu;Du, Xiongming;Wang, Liyuan;Xia, Yingying
作者机构：
关键词： Fiber development; Whole transcriptome; Fatty acid synthesis
期刊名称：INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES （ 影响因子：8.2； 五年影响因子：7.8 ）
ISSN： 0141-8130
年卷期： 2024 年 266 卷
页码：
收录情况： SCI
摘要： Cotton fiber holds immense importance as the primary raw material for the textile industry. Consequently, comprehending the regulatory mechanisms governing fiber development is pivotal for enhancing fiber quality. Our study aimed to construct a regulatory network of competing endogenous RNAs (ceRNAs) and assess the impact of non -coding RNAs on gene expression throughout fiber development. Through whole transcriptome data analysis, we identified differentially expressed genes (DEGs) regulated by non -coding RNA (ncRNA) that were predominantly enriched in phenylpropanoid biosynthesis and the fatty acid elongation pathway. This analysis involved two contrasting phenotypic materials (J02-508 and ZRI015) at five stages of fiber development. Additionally, we conducted a detailed analysis of genes involved in fatty acid elongation, including KCS , KCR , HACD , ECR , and ACOT , to unveil the factors contributing to the variation in fatty acid elongation between J02-508 and ZRI015. Through the integration of histochemical GUS staining, dual luciferase assay experiments, and correlation analysis of expression levels during fiber development stages for lncRNA MSTRG.44818.23 (MST23) and GhKCR2 , we elucidated that MST23 positively regulates GhKCR2 expression in the fatty acid elongation pathway. This identification provides valuable insights into the molecular mechanisms underlying fiber development, emphasizing the intricate interplay between non -coding RNAs and protein -coding genes.
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