The complete nucleotide sequence and its organization of the genome of Barley yellow dwarf virus-GAV

文献类型： 外文期刊

第一作者： Jin, ZB

作者： Jin, ZB;Wang, XF;Chang, SJ;Zhou, GH

作者机构：

关键词： barley yellow dwarf virus-GAV (BYDV-GAV);genomic organization;taxonomy

期刊名称：SCIENCE IN CHINA SERIES C-LIFE SCIENCES （ 影响因子：1.61； 五年影响因子：1.148 ）

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年卷期：

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收录情况： SCI

摘要： The complete nucleotide sequence of genomic RNA of BYDV-GAV was determined. It comprised 5685 nucleotides and contained six open reading frames and four un-translated regions. The size and organization of BYDV-GAV genome were similar to those of BYDV PAV-aus. The nucleotide and deduced amino acid sequences of the six ORFs were aligned and compared with those of other luteoviruses. The results showed that there was a high degree of identity between BYDV-GAV and MAV-PS1 in all ORFs except ORF5 and ORF6, which had only 87.4% and 70.2% identities respectively. The reported genomic nucleotide sequence of MAV was shorter than that of BYDV-GAV, but the comparison of the genomic nucleotide sequences for MAV-PS1 and GAV showed 90.4% sequence identity for the same region of the genome. According to the level of sequence similarities, BYDV-GAV should be closely related to BYDV-MAV.

分类号： Q1

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