Genetic diversity and population structure of Chinese mountain cultivated Panax ginseng accessions using SSR and KASP markers
文献类型： 外文期刊
第一作者： Li, Yashu
作者： Li, Yashu;Li, Ranqi;Zhang, Ning;Zhang, Jingjing;Hou, Wei;Qu, Zhengyi;Zheng, Peihe
作者机构：
关键词： Genetic diversity; Kompetitive allele-specific PCR; Mountain cultivated Panax ginseng; Simple sequence repeat; Population structure
期刊名称：GENETIC RESOURCES AND CROP EVOLUTION （ 影响因子：2.0； 五年影响因子：1.9 ）
ISSN： 0925-9864
年卷期： 2023 年
页码：
收录情况： SCI
摘要： Ginseng (Panax ginseng Meyer) possesses numerous pharmacological effects. The economic and medicinal value of mountain-cultivated P. ginseng (MCPG) exceeds that of garden P. ginseng. However, the genetic diversity of MCPG populations remains poorly understood. Therefore, this study aims to explore the genetic diversity of MCPG in three locations in China and provide guidance for resource conservation and utilization. We conducted an analysis of the genetic diversity and population structure of 108 MCPG germplasms using 10 simple sequence repeat (SSR) markers and 10 Kompetitive allele-specific PCR (KASP) markers. These germplasms were collected from various locations, including Huinan County (HN) of Tonghua City, Jilin Province, Kuandian Manchu Autonomous County (KD) of Dandong City, Liaoning Province, and Yanji City (YJ) of Yanbian Korean Autonomous Prefecture, Jilin Province. The research findings indicate that most of the 10 SSR markers exhibited multiple-band patterns. The markers used in the study revealed a range of 2 to 20 alleles at each single locus. The polymorphism information content (PIC) of the markers varied from 0.2603 to 0.8325, with an average of 0.5291. As expected, all the KASP loci displayed two alleles, and the PIC of these markers ranged from 0.2562 to 0.3701, with an average of 0.3242. Our results highlight that both sets of markers indicated a relatively high genetic diversity in MCPG. Additionally, there was no significant difference in genetic diversity among the three populations, and their phylogenetic relationship displayed intermingled positioning. The total genetic differences mainly originated from individual variations rather than different groups.
分类号：
- 相关文献
作者其他论文 更多>>
-
Research on Positioning and Navigation System of Greenhouse Mobile Robot Based on Multi-Sensor Fusion
作者：Cheng, Bo;Li, Xiaoyue;Zhang, Ning;Song, Weitang;He, Xueying;Wu, Huarui
关键词：agricultural greenhouse; navigation robot; multi-sensor fusion; ultra-wideband; inertial measurement unit; odometry; rangefinder
-
Beneficial effects of American ginseng (Panax quinquefolius L.) extract residue as a feed additive on production, health status, and gastrointestinal bacteria in sika deer (Cervus nippon)
作者：Wu, Yan;Zhao, Shuting;Qu, Zhengyi;Hou, Wei;Yuan, Weitao;Wang, Kaiying;Zheng, Peihe;Liu, Hanlu;Feng, Tao;Zhan, Xiaofeng;Shen, Jinlong
关键词：American ginseng residue; antioxidant; gastrointestinal bacteria; rumen fermentation; sika deer
-
Deciphering the performance and mechanisms of glycolipids in regulating crop growth in coastal saline-alkali soils: Perspectives on soil properties and microbial communities
作者：Zhang, Ning;Wei, Xuefeng;Liu, Qing;Shen, Qi;Tang, Jiangwu;Sun, Hong;Zhou, Hanghai;Liu, Qing;Chen, Chunlei;Zhang, Chunfang;Jiang, Lijia;Zhou, Hanghai;Atakpa, Edidiong Okokon;Zheng, Gang
关键词：Coastal saline -alkali soils; Soil amelioration; Rhamnolipids; Sophorolipids; Crop growth; Microbial community
-
Effect of Different Light Qualities on Essential Oil and Asarinin in Asarum heterotropoides Fr. Schmidt var. mandshuricum (Maxim.) Kitag
作者：Wang, Zhiqing;Wang, Guanghui;Quan, Xingzhou;Zhang, Min;Li, Huiling;Zhang, Ze;Wang, Yanhong;Cui, Lili;Hou, Wei
关键词：asarinin; essential oil; phenylpropanoids; colored filter films; light quality; selective wavelength transmittance
-
m6A Methylation Mediates the Function of the circRNA-08436/miR-195/ELOVL6 Axis in Regards to Lipid Metabolism in Dairy Goat Mammary Glands
作者：Wang, Yu;Zhang, Ning;Chen, Zhi;Wang, Yu;Zhang, Ning;Chen, Zhi;Wang, Yu;Wu, Yanni;Yang, Sitian;Gao, Rui;Lv, Xiaoyang;Yang, Zhangping;Chen, Zhi;Lv, Xiaoyang;Yang, Zhangping;Chen, Zhi;Lv, Xiaoyang;Chen, Zhi;Jiao, Peixin;Loor, Juan J.;Loor, Juan J.
关键词：circRNA-08436; miR-195; ELOVL6; M(6)A methylation
-
Transcriptomic and Metabolomic Research on the Germination Process of Panax ginseng Overwintering Buds
作者：Li, Ranqi;Li, Yashu;Tang, Miaomiao;Qu, Zhengyi;Shao, Cai;Hou, Wei;Zheng, Peihe;Zheng, Peihe
关键词：ginseng overwintering buds; transcriptomic; metabolomic; plant hormones; arginine; polyamines (PAs)
-
Creating a new yellow and blue combination transparent film for Panax ginseng CA Meyer growth based on orthogonal designs
作者：Zhang, Zhenghai;Lei, Huixia;Zheng, Peihe;Zhang, Yayu;Sun, Hai;Shao, Cai;Zhao, Jingjing;Zhang, Zhenghai
关键词：Chlorophyll fluorescence; Photosynthetic rate; Leaf area; Dry root weight; Ginsenoside content
