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The complete mitochondrial genome of Ogmocotyle ailuri: gene content, composition and rearrangement and phylogenetic implications

文献类型：外文期刊

第一作者： Gao, Jun-Feng

作者： Gao, Jun-Feng;Zhang, Ai-Hui;Wei, Wei;Chen, Ying-Yu;Sun, Yun-Yi;Hou, Mei-Ru;Liu, Xue-Wei;Wang, Jia-Wen;Zhang, Xin-Hui;Wang, Chun-Ren;Gao, Jun-Feng;Zhang, Ai-Hui;Wei, Wei;Zhang, Jun;Li, Ben;Chen, Ying-Yu;Sun, Yun-Yi;Hou, Mei-Ru;Liu, Xue-Wei;Wang, Jia-Wen;Zhang, Xin-Hui;Wang, Chun-Ren;Gao, Jun-Feng;Zhang, Ai-Hui;Wei, Wei;Zhang, Jun;Li, Ben;Chen, Ying-Yu;Sun, Yun-Yi;Hou, Mei-Ru;Liu, Xue-Wei;Wang, Jia-Wen;Zhang, Xin-Hui;Wang, Chun-Ren;Jia, Bin;Zhang, Jun

作者机构：

关键词： Gene arrangement; mitochondrial genome; molecular phylogeny; Ogmocotyle ailuri

期刊名称：PARASITOLOGY （影响因子：2.4；五年影响因子：2.8 ）

ISSN： 0031-1820

年卷期： 2023 年 150 卷 8 期

页码：

收录情况： SCI

摘要： Trematodes of the genus Ogmocotyle are intestinal flukes that can infect a variety of definitive hosts, resulting in significant economic losses worldwide. However, there are few studies on molecular data of these trematodes. In this study, the mitochondrial (mt) genome of Ogmocotyle ailuri isolated from red panda (Ailurus fulgens) was determined and compared with those from Pronocephalata to investigate the mt genome content, genetic distance, gene rearrangements and phylogeny. The complete mt genome of O. ailuri is a typical closed circular molecule of 14 642 base pairs, comprising 12 protein-coding genes (PCGs), 22 transfer RNA genes, 2 ribosomal RNA genes and 2 non-coding regions. All genes are transcribed in the same direction. In addition, 23 intergenic spacers and 2 locations with gene overlaps were determined. Sequence identities and sliding window analysis indicated that cox1 is the most conserved gene among 12 PCGs in O. ailuri mt genome. The sequenced mt genomes of the 48 Plagiorchiida trematodes showed 5 types of gene arrangement based on all mt genome genes, with the gene arrangement of O. ailuri being type I. Phylogenetic analysis using concatenated amino acid sequences of 12 PCGs revealed that O. ailuri was closer to Ogmocotyle sikae than to Notocotylus intestinalis. These data enhance the Ogmocotyle mt genome database and provide molecular resources for further studies of Pronocephalata taxonomy, population genetics and systematics.

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