Characterization of the complete mitochondrial genome of the orange swift, Triodia sylvina
文献类型: 外文期刊
第一作者: Li, Chao
作者: Li, Chao;Li, Lili;Men, Xingyuan;Lu, Zengbin;Sun, Yixin;Liu, Li;Dong, Song
作者机构:
关键词: Triodia sylvina; mitochondrial genome; assembly; phylogeny
期刊名称:MITOCHONDRIAL DNA PART B-RESOURCES ( 影响因子:0.658; 五年影响因子:0.674 )
ISSN: 2380-2359
年卷期: 2018 年 3 卷 2 期
页码:
收录情况: SCI
摘要: In this study, the complete mitochondrial genome of orange swift, Triodia sylvina, was recovered through Illumina sequencing data. This complete mitochondrial genome of T. sylvina is 15,040 bp in length and has a base composition of A (41.0%), T (41.2%), C (10.4%), G (7.5%), demonstrating an extreme bias of high AT content (82.2%). The mitochondrial genome contains a typically conserved structure among moth mitogenomes, encoding 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, two ribosomal RNA (12S rRNA and 16S rRNA) genes and a control region (D-loop region). Seven PCGs were located on the H-strand, others were located on the L-strand. ATP8 gene and ATP6 gene were overlapped by 6 bp. ND4 gene and ND4L gene were overlapped by 9 bp. The whole mt genome of T. sylvina and other moth and butterfly mitogenomes (100 species, in total) were used for phylogenetic analysis. The result indicated T. sylvina represents a distinct genus, which separated far from genus Hepialus.
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