Microbiome homeostasis on rice leaves is regulated by a precursor molecule of lignin biosynthesis

文献类型： 外文期刊

第一作者： Su, Pin

作者： Su, Pin;Zhang, Deyong;Liu, Yong;Su, Pin;Zhang, Deyong;Liu, Yong;Kang, Houxiang;Peng, Qianze;Zhang, Deyong;Peng, Qianze;Zhang, Deyong;Wicaksono, Wisnu Adi;Berg, Gabriele;Cernava, Tomislav;Berg, Gabriele;Berg, Gabriele;Liu, Zhuoxin;Ma, Jiejia;Cernava, Tomislav

作者机构：

期刊名称：NATURE COMMUNICATIONS （ 影响因子：16.6； 五年影响因子：17.0 ）

ISSN：

年卷期： 2024 年 15 卷 1 期

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收录情况： SCI

摘要： In terrestrial ecosystems, plant leaves provide the largest biological habitat for highly diverse microbial communities, known as the phyllosphere microbiota. However, the underlying mechanisms of host-driven assembly of these ubiquitous communities remain largely elusive. Here, we conduct a large-scale and in-depth assessment of the rice phyllosphere microbiome aimed at identifying specific host-microbe links. A genome-wide association study reveals a strong association between the plant genotype and members of four bacterial orders, Pseudomonadales, Burkholderiales, Enterobacterales and Xanthomonadales. Some of the associations are specific to a distinct host genomic locus, pathway or even gene. The compound 4-hydroxycinnamic acid (4-HCA) is identified as the main driver for enrichment of bacteria belonging to Pseudomonadales. 4-HCA can be synthesized by the host plant's OsPAL02 from the phenylpropanoid biosynthesis pathway. A knockout mutant of OsPAL02 results in reduced Pseudomonadales abundance, dysbiosis of the phyllosphere microbiota and consequently higher susceptibility of rice plants to disease. Our study provides a direct link between a specific plant metabolite and rice phyllosphere homeostasis opening possibilities for new breeding strategies.

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