Genome Sequence Resource of Pectobacterium polaris QK413-1 that Causes Blackleg on Potato in Fujian Province, China

文献类型： 外文期刊

第一作者： Lin, Zhijian

作者： Lin, Zhijian;Li, Huawei;Luo, Wenbin;Xu, Yongqing;Xu, Guochun;Ji, Rongchang;Liu, Zhonghua;Zhang, Hong;Lin, Zhaomiao;Li, Guoliang;Qiu, Yongxiang;Tang, Hao;Qiu, Sixin;Lin, Zhijian;Li, Huawei;Luo, Wenbin;Xu, Yongqing;Xu, Guochun;Ji, Rongchang;Liu, Zhonghua;Zhang, Hong;Lin, Zhaomiao;Li, Guoliang;Qiu, Yongxiang;Tang, Hao;Qiu, Sixin

作者机构：

关键词： complete genome sequence; epidemiology; field crops; Illumina sequencing; PacBio Sequel II; pathogen diversity; pathogen survival; Pectobacterium polaris; potato blackleg disease

期刊名称：PLANT DISEASE （ 影响因子：4.5； 五年影响因子：5.0 ）

ISSN： 0191-2917

年卷期： 2023 年 107 卷 7 期

页码：

收录情况： SCI

摘要： The Pectobacterium pathogens cause soft rot and blackleg diseases on many plants and crops, including potatoes. Here, we first report a high-quality genome assembly and announcement of the P. polaris strain QK413-1, which causes blackleg disease in potatoes in China. The QK413-1 genome was sequenced and assembled using the PacBio Sequel II and Illumina sequencing platform. The assembled genome has a total size of 5,005,507 bp with a GC content of 51.81%, encoding 4,782 open reading frames, including 639 virulence genes, 273 drug resistance genes, and 416 secreted proteins. The QK413-1 genome sequence provides a valuable resource for the control of potato blackleg and research into its mechanism.

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