Evaluation of the early defoliation trait and identification of resistance genes through a comprehensive transcriptome analysis in pears
文献类型: 外文期刊
第一作者: Shan Yan-fei
作者: Shan Yan-fei;Li Meng-yan;Wang Run-ze;Li Jia-ming;Zhao Ke-jiao;Wu Jun;Li Xiao-gang;Lin Jing
作者机构:
关键词: pear; early defoliation; resistance and susceptibility evaluation; RNA-seq; WRKY; ERF
期刊名称:JOURNAL OF INTEGRATIVE AGRICULTURE ( 影响因子:4.8; 五年影响因子:4.8 )
ISSN: 2095-3119
年卷期: 2023 年 22 卷 1 期
页码:
收录情况: SCI
摘要: Early defoliation, which usually occurs during summer in pear trees, is gradually becoming a major problem that poses a serious threat to the pear industry in southern China. However, there is no system for evaluating the responses of different cultivars to early defoliation, and our knowledge of the potential molecular regulation of the genes underlying this phenomenon is still limited. In this study, we conducted field investigations of 155 pear accessions to assess their resistance or susceptibility to early defoliation. A total of 126 accessions were found to be susceptible to early defoliation, and only 29 accessions were resistant. Among them, 19 resistant accessions belong to the sand pear species (Pyrus pyrifolia). To identify the resistance genes related to early defoliation, the healthy and diseased samples of two sand pear accessions, namely, the resistant early defoliation accession `Whasan' and the susceptible early defoliation accession `Cuiguan', were used to perform RNA sequencing. Compared with `Cuiguan', a total of 444 genes were uniquely differentially expressed in `Whasan'. Combined with GO and KEGG enrichment analyses, we found that early defoliation was closely related to the stress response. Furthermore, a weighted gene co-expression network analysis revealed a high correlation of WRKY and ethylene responsive factor (ERF) transcription factors with early defoliation resistance. This study provides useful resistant germplasm resources and new insights into potentially essential genes that respond to early defoliation in pears, which may facilitate a better understanding of the resistance mechanism and molecular breeding of resistant pear cultivars.
分类号:
- 相关文献
作者其他论文 更多>>
-
Quantitative Inversion of Soil Organic Matter Content Based on Continuous Wavelet Transform
作者:Wang Yan-tang;Zhang Lan;Wang Huan;Zhuang Lian-ying;Duan Long-fang;Li Jia-jun;Lin Jing;Gu Xiao-he;Wang Yan-tang;Zhang Lan;Wang Huan;Zhuang Lian-ying;Duan Long-fang;Li Jia-jun;Lin Jing;Gu Xiao-he
关键词:Soil organic matter; Continuous wavelet transformation; Hyperspectral
-
Differential expressions among five Waxy alleles and their effects on the eating and cooking qualities in specialty rice cultivars
作者:Sheng Wen-tao;Wu Jun;Deng Qi-yun;Zhou Li-jie;Sheng Wen-tao;Wu Jun;Deng Qi-yun;Liu Qiao-quan
关键词:Oryza sativa L.;Waxy gene;allele;amylose;RVA
-
Analysis of Genetic Diversity in Natural Populations of Psathyrostachys huashanica Keng Using Microsatellite (SSR) Markers
作者:Liu Wen-xian;Liu Wei-hua;Gao Ai-nong;Li Li-hui;Liu Wen-xian;Liu Wen-xian;Wu Jun
关键词:Psathyrostachys huashanica Keng;SSR;genetic diversity;conservation implication