A haplotype-resolved chromosomal-level genome assembly of Oxalis articulata

文献类型: 外文期刊

第一作者: Yang, Wenjie

作者: Yang, Wenjie;Jiang, Changci;Bi, Changwei;Zhao, Zhuang;Fu, Chenlong;Wang, Zefu;Yang, Wenjie;Hu, Quanjun;Li, Fangping;Hou, Zhuangwei

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期刊名称:SCIENTIFIC DATA ( 影响因子:6.9; 五年影响因子:8.7 )

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年卷期: 2025 年 12 卷 1 期

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收录情况: SCI

摘要: Oxalis articulata is a widely distributed perennial herb known for its adaptability to diverse environmental conditions. Here, we report the first haplotype-resolved, chromosome-scale genome assembly for O. articulata (Oxalidaceae), generated through PacBio HiFi long reads and Hi-C technology. The resulting assembly comprises two haplotypes with sizes of 377.04 Mb (contig N50 = 31.13 Mb) and 342.70 Mb (contig N50 = 47.46 Mb), respectively. We predicted 36,063 protein-coding genes (94.33% functionally annotated) and 38,292 protein-coding genes (93.80% functionally annotated) in the two haplotypes, respectively. This high-quality genome assembly lays a solid groundwork for future initiatives in ecological and biochemical research for O. articulata.

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