Gene expression profiling of Sinapis alba leaves under drought stress and rewatering growth conditions with Illumina deep sequencing

文献类型: 外文期刊

第一作者: Dong, Cai-Hua

作者: Dong, Cai-Hua;Yan, Xiao-Hong;Huang, Shun-Mou;Wang, Li-Jun;Guo, Rui-Xing;Lu, Guang-Yuan;Zhang, Xue-Kun;Fang, Xiao-Ping;Wei, Wen-Hui;Li, Chen;Huang, Jin-Yong

作者机构:

关键词: Sinapis alba;Drought stress;Illumina sequencing;Gene expression;Drought tolerance genes

期刊名称:MOLECULAR BIOLOGY REPORTS ( 影响因子:2.316; 五年影响因子:2.357 )

ISSN:

年卷期:

页码:

收录情况: SCI

摘要: Sinapis alba has many desirable agronomic traits including tolerance to drought. In this investigation, we performed the genome-wide transcriptional profiling of S. alba leaves under drought stress and rewatering growth conditions in an attempt to identify candidate genes involved in drought tolerance, using the Illumina deep sequencing technology. The comparative analysis revealed numerous changes in gene expression level attributable to the drought stress, which resulted in the down-regulation of 309 genes and the up-regulation of 248 genes. Gene ontology analysis revealed that the differentially expressed genes were mainly involved in cell division and catalytic and metabolic processes. Our results provide useful information for further analyses of the drought stress tolerance in Sinapis, and will facilitate molecular breeding for Brassica crop plants.

分类号: Q7

  • 相关文献

[1]VfCPK1, a gene encoding calcium-dependent protein kinase from Vicia faba, is induced by drought and abscisic acid. Liu, Guanshan,Chen, Jia,Wang, Xuechen. 2006

[2]DE NOVO TRANSCRIPTOME ANALYSIS OF MULBERRY (MORUS L.) UNDER DROUGHT STRESS USING RNA-SEQ TECHNOLOGY. Wang, Heng,Tong, Wei,Feng, Li,Jiao, Qian,Long, Li,Fang, Rongjun,Zhao, Weiguo,Long, Li,Zhao, Weiguo,Fang, Rongjun,Zhao, Weiguo.

[3]Identification and expression analysis of genes responsive to drought stress in peanut. Hou, L.,Liu, W.,Li, Z.,Huang, C.,Fang, X. L.,Wang, Q.,Liu, X.,Hou, L.,Liu, W.,Li, Z.,Huang, C.,Fang, X. L.,Wang, Q.,Liu, X.,Fang, X. L..

[4]Insight into the AP2/ERF transcription factor superfamily in sesame and expression profiling of DREB subfamily under drought stress. Dossa, Komivi,Wei, Xin,Li, Donghua,Zhang, Yanxin,Wang, Linhai,Yu, Jingyin,Boshou, Liao,Zhang, Xiurong,Dossa, Komivi,Fonceka, Daniel,Cisse, Ndiaga,Dossa, Komivi,Diouf, Diaga,Fonceka, Daniel. 2016

[5]Physiological changes and differential gene expression of tea plant under dehydration and rehydration conditions. Liu, Sheng-Chuan,Yao, Ming-Zhe,Ma, Chun-Lei,Jin, Ji-Qiang,Ma, Jian-Qiang,Li, Chun-Fang,Chen, Liang,Liu, Sheng-Chuan.

[6]Cloning and characterization of up-regulated HbSINA4 gene induced by drought stress in Tibetan hulless barley. Yuan, H. J.,Nyima, T. S.,Wang, Y. L.,Xu, Q. J.,Zeng, X. Q.,Yuan, H. J.,Nyima, T. S.,Wang, Y. L.,Xu, Q. J.,Zeng, X. Q.,Luo, X. M.. 2015

[7]Influence of 5-aminolevulinic acid on photosynthetically related parameters and gene expression in Brassica napus L. under drought stress. Liu, D.,Yang, A. G.,Hu, L. Y.,Ali, B.,Wan, G. L.,Zhou, W. J.,Hu, L. Y.,Ali, B.,Wan, G. L.,Zhou, W. J.,Xu, L.,Xu, L..

[8]Genome-Wide Identification and Expression Analysis of the KUP Family under Abiotic Stress in Cassava (Manihot esculenta Crantz). Ou, Wenjun,Li, Kaimian,Mao, Xiang,Huang, Chao,Tie, Weiwei,Yan, Yan,Ding, Zehong,Wu, Chunlai,Xia, Zhiqiang,Wang, Wenquan,Li, Kaimian,Hu, Wei,Zhou, Shiyi. 2018

[9]De novo Transcriptome Analysis of Sinapis alba in Revealing the Glucosinolate and Phytochelatin Pathways. Zhang, Xiaohui,Liu, Tongjin,Duan, Mengmeng,Song, Jiangping,Li, Xixiang. 2016

[10]Cytogenetic analysis of F-1, F-2 and BC, plants from intergeneric sexual hybridization between Sinapis alba and Brassica oleracea by genomic in situ hybridization. Wei, W. H.,Zhang, S. F.,Wang, L. J.,Li, J.,Chen, B.,Wang, Z.,Luo, L. X.,Fang, X. P.. 2007

[11]Analysis of intergeneric sexual hybridization between transgenic Brassica oleracea and Sinapis alba. Li, Jun,Wei, Wenhui,Lu, Guangyuan,Li, Jun,Zhang, Chunlei,Luo, Lixia,Ren, Li,Fang, Xiaoping,Guan, Chunyun,Lu, Guangyuan.

[12]Comparative Analysis of the Complete Chloroplast Genome of Four Endangered Herbals of Notopterygium. Jiao Yang,Li, Zhong-Hu,Ma, Xiong-Feng,Ming Yue,Chuan Niu,Xiong-Feng Ma,Zhong-Hu Li. 2017

[13]Identification and characterization of lymph organ microRNAs in red swamp crayfish, Procambarus clarkii infected with white spot syndrome virus. Du, Zhi-Qiang,Leng, Xiao-Yun,Jin, Yan-Hui,Shen, Xiu-Li,Li, Xin-Cang. 2017

[14]Sequencing of complete mitochondrial genome of brown algal Saccharina sp ye-C6. Xu, Le,Wang, Shuai,Xu, Le,Wang, Shuai,Fan, Xiao,Xu, Dong,Zhang, Xiaowen,Miao, Yu,Ye, Naihao. 2016

[15]Sequencing of complete mitochondrial genome of brown algal Saccharina sp ye-F. Fan, Xiao,Wang, Shuai,Xu, Dong,Zhang, Xiaowen,Xu, Le,Miao, Yu,Ye, Naihao,Wang, Shuai,Xu, Le. 2016

[16]Impact of tillage practices on soil bacterial diversity and composition under the tobacco-rice rotation in China. Lei, Yanping,Xiao, Yongliang,Li, Lifeng,Cao, Hui,Jiang, Chaoqiang,Zu, Chaolong,Li, Tian. 2017

[17]Sequencing of complete mitochondrial genome of brown algal Saccharina sp ye-G. Guan, Zheng,Wang, Shuai,Fan, Xiao,Xu, Dong,Zhang, Xiaowen,Miao, Yu,Ye, Naihao,Wang, Dongsheng. 2016

[18]Deep transcriptome sequencing of rhizome and aerial-shoot in Sorghum propinquum. Zhang, Ting,Zhao, Xiuqin,Wang, Wensheng,Huang, Liyu,Liu, Xiaoyue,Zong, Ying,Zhu, Linghua,Fu, Binying,Li, Zhikang,Zhang, Ting,Yang, Daichang.

[19]Illumina sequencing reveals a rhizosphere bacterial community associated with foxtail millet smut disease suppression. Han, Yansha,Xu, Lixia,Liu, Liqing,Yi, Min,Yi, Huilan,Guo, Erhu,Zhang, Aiying.

[20]Microbial community response during the treatment of pharmaceutically active compounds (PhACs) in constructed wetland mesocosms. Yan, Qing,Min, Jie,Yu, Yonghong,Zhu, Zhiwei,Feng, Guozhong,Yan, Qing,Min, Jie,Yu, Yonghong,Zhu, Zhiwei.

作者其他论文 更多>>