Analysis of genetic diversity and population structure of Pleuronectes yokohamae indicated by AFLP markers

文献类型： 外文期刊

第一作者： Zhang, Hui

作者： Zhang, Hui;Yu, Han;Zhang, Yan;Zhang, Hui;Gao, Tianxiang;Han, Zhiqiang;Xiao, Yongshuang

作者机构：

关键词： Pleuronectes yokohamae;AFLP;Genetic diversity;Population structure

期刊名称：BIOCHEMICAL SYSTEMATICS AND ECOLOGY （ 影响因子：1.381； 五年影响因子：1.351 ）

ISSN：

年卷期：

页码：

收录情况： SCI

摘要： Amplified fragment length polymorphism (AFLP) was used to analyze the genetic diversity and variation of two populations of Pleuronectes yokohamae from China and North Korea. A total of 228 loci ranging in size were detected from 63 individuals, of which 139 were polymorphic. The number of bands per primer combination varied from 37 to 51 and the percentage of polymorphic bands per primer combination ranged from 43.14% to 72.97%.The proportion of polymorphic loci, the Nei's genetic diversity and Shannon genetic diversity index of China and North Korea populations were 55.09% and 55.71%, 0.1205 and 0.1917, 0.1370 and 0.2129, respectively. The results showed that the genetic diversity of these two populations was at the same level. Dominant gene frequency revealed that these two populations have the same genetic population structure. F-st value of the two populations was 0.0986 and AMOVA analysis indicated that 80.75% genetic variation came from individuals within populations, and there were also 19.25% genetic differentiation occurred between the two populations. There was significant genetic difference between two populations. Exact-p test showed there was no random genetic communication between two populations. The UPGMA and NJ trees based on AFLP data supported this result

分类号： Q5

  • 相关文献

[1]Investigations on genetic diversity of northern snakehead (Channa argus) populations in China using amplified fragment length polymorphism (AFLP) markers. Zhou, Aiguo,Luo, Junzhi,Zou, Jixing,Zhuo, Xiaolei,Huang, Guiju,Yu, Dahui.

[2]Genetic diversity and population structure of 288 potato (&ITSolanum tuberosum&IT L.) germplasms revealed by SSR and AFLP markers. Wang, Jian,Liu Qing-chang,Wang, Jian,He Miao-miao,Hou, Lu,Wang Ruo-yu. 2017

[3]Genetic variations within a collection of anthuriums unraveled by morphological traits and AFLP markers. Ge, Yaying,Zhang, Fei,Shen, Xiaolan,Yu, Yongming,Pan, Xiaoyun,Liu, Xiaojing,Liu, Jianxin,Pan, Gangmin,Tian, Danqing.

[4]Genetic diversity and relationships of the brown alga Undaria pinnatifida cultivated along the Dalian Coast as revealed by amplified fragment length polymorphism markers. Li, Shiguo,Qiao, Kun,Hou, Hesheng,Li, Shiguo,Shan, Tifeng,Pang, Shaojun.

[5]Amplified fragment length polymorphism analysis of Mythimna separata (Lepidoptera : Noctuidae) geographic and melanie laboratory populations in China. Luo, Li-Zhi,Zhang, Lei.

[6]Molecular variation among Chinese and global germplasm in spring faba bean areas. Redden, R.,Zong, X.,Ren, J.,Guan, J.,Wang, S.,Zong, X.,Liu, Q.,Paull, J. G..

[7]Autopolyploidy leads to rapid genomic changes in Arabidopsis thaliana. Liu, Shihong,Tian, Baoming,Wei, Fang.

[8]An assessment of the genetic diversity within Ganoderma strains with AFLP and ITS PCR-RFLP. Yang, Zhirong,Zheng, Linyong,Jia, Dinghong,Fei, Xiaofan,Luo, Xia. 2009

[9]Molecular diversity of Chinese Cucurbita moschata germplasm collections detected by AFLP markers. Chang, Zhijian,Zhan, Haixian,Wu, Junxin,Wu, Qingshan,Wu, Junxin,Chang, Zhijian,Xie, Shulian. 2011

[10]Genetic variation in the invasive process of Bursaphelenchus xylophilus (Aphelenchida : Aphelenchoididae) and its possible spread routes in China. Cheng, X-Y,Cheng, F-X,Xu, R-M,Xie, B-Y. 2008

[11]Analysis of the Germplasm Resources and Genetic Relationships among Cymbidium tortisepalum Cultivars Using Amplified Fragment Length Polymorphism Markers. Wu, X. Y.,Li, D. M.,Zhu, G. F.. 2013

[12]AFLP analysis on genetic diversity and population structure of small yellow croaker Larimichthys polyactis. Lin, Long Shan,Ying, Yi Ping,Xiao, Yong Shuang,Gao, Tian Xiang,Lin, Long Shan,Han, Zhi Qiang,Gao, Tian Xiang. 2009

[13]Genetic variation in wild and cultured populations of the pearl oyster Pinctada fucata from southern China. Yu, Da Hui,Chu, Ka Hou. 2006

[14]Genetic diversity of the Chinese traditional herb Blumea balsamifera (Asteraceae) based on AFLP markers. Pang, Y. X.,Zhang, Y. B.,Yu, J. B.,Zhu, M.,Chen, Y. Y.,Wang, W. Q.,Yuan, Y.. 2014

[15]Low genetic differentiation among widely separated populations of the pearl oyster Pinctada fucata as revealed by AFLP. Yu, DH,Chu, KH.

[16]Amplified Fragment Length Polymorphism Markers and Agronomic Traits Analysis Provide Strategies for Improvement of Bitter Gourd (Momordica charantia L.). Yang, Yan,Zhan, Yuanfeng,Liu, Weixia,Sun, Jihua. 2010

[17]Genetic evidence of local adaption and long distance migration in Blumeria graminis f. sp hordei populations from China. Zhu, Jinghuan,Shang, Yi,Hua, Wei,Wang, Junmei,Jia, Qiaojun,Yang, Jianming,Zhou, Yijun,Liu, Mengdao.

[18]Sequential loss of genetic variation in flea beetle Agasicles hygrophila (Coleoptera: Chrysomelidae) following introduction into China. Ma, Rui-Yan,Jia, Xiao-Yun,Zhao, Long-Long,Jia, Dong,Liu, Wen-Zhong,Laushman, Roger H.,Wang, Ren. 2013

[19]AFLP fingerprinting analysis of elite Hevea brasiliensis germplasm. Luo, AD,Chen, SC,Wu, KX,Fu, SP. 2001

[20]AFLP analysis revealed differences in genetic diversity of four natural populations of Manila clam (Ruditapes philippinarum) in China. Liu Xiangquan,Bao Zhenmin,Hu Jingjie,Wang Shi,Zhan Aibin,Liu Hui,Fang Jianguang,Wang Rucai.

作者其他论文 更多>>

微信小程序