MicroRNA profile analysis on duck feather follicle and skin with high-throughput sequencing technology

文献类型: 外文期刊

第一作者: Zhang, Li

作者: Zhang, Li;Su, Ying;Nie, Qinghua;Xie, Xiujuan;Luo, Wen;Jia, Xinzheng;Zhang, Xiquan

作者机构:

关键词: Duck;Feather;Hair (feather) follicle;MicroRNA;Skin

期刊名称:GENE ( 影响因子:3.688; 五年影响因子:3.329 )

ISSN:

年卷期:

页码:

收录情况: SCI

摘要: Skin acts an important protection role in animal survival and it evolves with the animal divergence. We identified the conserved miRNA families of skin among duck and other species. Cluster analysis showed that the species with similar skin characteristics were clustered into the same group, indicating miRNAs are important in skin function and skin evolution. The miRNA profiles demonstrated that different miRNA regulation mechanism may exist in contour feather follicles (with the surrounding skin) and down feather follicles (with the surrounding skin). Comparing the highly abundant miRNAs with those of mammalian hair follicles and skins, different miRNAs and miRNA families were found, suggesting the different ways in feather follicles and mammalian hair follicles. Bioinformatics prediction indicated that seven miRNAs probably targeted the genes of Wnt/??-catenin, Shh/BMP and Notch pathways which were important in feather morphogenesis. Further analysis should be conducted to experimentally validate the relationships between miRNAs and their predicted target genes because the target genes were based exclusively upon the bioinformatics. ? 2013 Elsevier B.V.

分类号: R394

  • 相关文献

[1]Molecular Cloning, Characterization and Expression Analysis of Duck Tyrosinase-Related Protein-1. Wang, Cui,Yu, Huawen,Peng, Xiuli,Feng, Yanping,Gong, Yanzhang,Li, Shijun,Liang, Zhenhua. 2010

[2]MicroRNAs in the immune organs of chickens and ducks indicate divergence of immunity against H5N1 avian influenza. Li, Zezhong,Zhang, Jinyu,Liu, Yinuo,Guo, Jiang,Zhang, Yonghong,Xing, Shenyang,Sun, Boxing,Zhao, Zhihui,Li, Zezhong,Zhang, Jinyu,Liu, Yinuo,Guo, Jiang,Zhang, Yonghong,Xing, Shenyang,Sun, Boxing,Zhao, Zhihui,Lu, Chunyan,Su, Jiazi,Guan, Yuntao,Li, Yanbing.

[3]MiR-144 affects fatty acid composition by regulating ELOVL6 expression in duck hepatocytes. He, Jun,Tian, Yong,Liu, Yali,Tao, Zhengrong,Li, Guoqin,Lu, Lizhi,He, Jun,Zhao, Yan,Niu, Dong,Lu, Yingru.

[4]Expression of Vimentin in hair follicle growth cycle of inner Mongolian Cashmere goats. Rile, Nai,Liu, Zhihong,Xie, Yuchun,Su, Rui,Zhang, Yanjun,Wang, Ruijun,Li, Jie,Xiao, Hongmei,Li, Jinquan,Rile, Nai,Liu, Zhihong,Xie, Yuchun,Rile, Nai,Rile, Nai,Qi, Jingkai,Zhao, Meng,Gao, Lixia. 2018

[5]Characterization of MicroRNA* Species in Peking Duck Skin. Zhang Li,Xiao Mei,An Li-long,Xie Xiu-juan,Lin Shu-dai,Luo Wen,Jia Xin-zheng,Nie Qing-hua,Zhang Xi-quan,Jia Shan-gang. 2013

[6]The Characteristics Of Gelatin Extracted From Sturgeon (acipenser Baeri) Skin Using Various Pretreatments. Hao, Shuxian,Li, Laihao,Yang, Xianqing,Cen, Jianwei,Shi, Hong,Bo, Qi,He, Junyan.

[7]De novo assembly and characterization of skin transcriptome using RNAseq in sheep (Ovis aries). Yue, Y. J.,Yang, B. H.,Yue, Y. J.,Liu, J. B.,Yang, M.,Han, J. L.,Guo, T. T.,Guo, J.,Feng, R. L.,Yang, B. H.. 2015

[8]Comparative Study of Transcriptome Profiles of Mouse Livers and Skins Infected by Fork-Tailed or Non-Fork-Tailed Schistosoma japonicum. Yang, Yan,Hu, Shuang,Chang, Hua,Xiang, Xun,Yang, Jian-Fa,Zou, Feng-Cai,He, Jun-Jun. 2017

[9]Molecular cloning, characterization and expression analysis of gonadal P450 aromatase in the half-smooth tongue-sole, Cynoglossus semilaevis. Deng, Si-Ping,Chen, Song-Lin,Xu, Jian-Yong,Liu, Ben-Wei,Deng, Si-Ping.

[10]Studies on Aroma Volatile Constituents from Four Varieties of Ripe Mango in China. Wei, Chang-bin,Wu, Hong-xia,Liu, Yu-ge,Xing, Shan-shan,Wang, Song-biao,Zang, Xiao-ping,Zhan, Ru-lin.

[11]Host Innate Immune Responses of Ducks Infected with Newcastle Disease Viruses of Different Pathogenicities. Kang, Yinfeng,Li, Yanling,Yuan, Runyu,Feng, Minsha,Xiang, Bin,Sun, Minhua,Li, Yaling,Xie, Peng,Tan, Yangtong,Ren, Tao,Kang, Yinfeng,Li, Yanling,Yuan, Runyu,Feng, Minsha,Xiang, Bin,Sun, Minhua,Li, Yaling,Xie, Peng,Tan, Yangtong,Ren, Tao,Kang, Yinfeng,Li, Yanling,Feng, Minsha,Xiang, Bin,Ren, Tao,Yuan, Runyu,Sun, Minhua. 2015

[12]Molecular cloning, characterization, and expression of duck 2'-5'-oligoadenylate synthetase-like gene. Bi, Ke-Ran,Han, Kai-Kai,Liu, Qing-Tao,Zhao, Dong-Min,Huang, Xin-Mei,Liu, Yu-Zhuo,Yang, Jing,Li, Yin,Bi, Ke-Ran. 2017

[13]Gene expression profiling reveals candidate genes related to residual feed intake in duodenum of laying ducks. Zeng, T.,Huang, L.,Ren, J.,Chen, L.,Tian, Y.,Lu, L.,Huang, L.,Huang, Y.,Zhang, H.,Du, J.. 2017

[14]Expression pattern of adipocyte fatty acid-binding protein gene in different tissues and its regulation of genes related to adipocyte differentiation in duck. He, J.,Tian, Y.,Li, J. J.,Shen, J. D.,Tao, Z. R.,Lu, L. Z.,He, J.,Fu, Y.,Niu, D.,Lu, L. Z.. 2012

[15]Polymorphism of the prolactin gene and its association with egg production traits in native Chinese ducks. Wang, Cui,Yu, Wenhua,Feng, Yanping,Peng, Xiuli,Gong, Yanzhang,Li, Shijun,Liang, Zhenhua. 2011

[16]Effects of linoleic acid and eicosapentaenoic acid on cell proliferation and lipid-metabolism gene expression in primary duck hepatocytes. Liu, W. M.,Lu, L. Z.,Zhang, C.,Liu, Y. L.,Zhang, J.,Tao, Z. R.,Shen, J. D.,Li, G. Q.,Wang, D. Q.,Li, J. J.,Tian, Y.,Liu, W. M.,Shi, F. X.,Liu, Y. L.,Zhang, J.. 2011

[17]Quantitative Proteomic Analysis of Duck Ovarian Follicles Infected with Duck Tembusu Virus by Label-Free LC-MS. Han, Kaikai,Zhao, Dongmin,Liu, Yuzhuo,Liu, Qingtao,Huang, Xinmei,Yang, Jing,An, Fengjiao,Lin, Yin,Han, Kaikai,Zhao, Dongmin,Liu, Yuzhuo,Liu, Qingtao,Huang, Xinmei,Yang, Jing,An, Fengjiao,Lin, Yin. 2016

[18]Isolation and Characterization of Mesenchymal Stem Cells Derived from Duck Embryo Liver. Wang, Wenjie,Guan, Weijun,Ma, Yuehui,Huang, Hongmei,Li, Qian,Wang, KunFu,Chen, Jia. 2017

[19]SHORT COMMUNICATION: Analysis of intramuscular fat and fatty acids of different duck breeds and their association with SNPs of duck A-FABP gene. He, Jun,Fu, Yan,Niu, Dong,He, Jun,Lu, Lizhi,Tian, Yong,Tao, Zhengrong,Wang, Deqian,Li, Jinjun,Li, Guoqin,Shen, Junda. 2011

[20]Glutamine Ameliorates Mucosal Damage Caused by Immune Responses to Duck Plague Virus. Zhang, Yuanyuan,Zhao, Lili,Zhou, Yan,Diao, Chenxi,Han, Lingxia,Niu Yinjie,Chen, Hongyan,Liu, Shengwang. 2017

作者其他论文 更多>>