Population structure of Phytophthora infestans in China - geographic clusters and presence of the EU genotype Blue_13

文献类型： 外文期刊

第一作者： Huang, S. W.

作者： Huang, S. W.;van der Lee, T.;Kessel, G.;Zhu, J. H.;Jin, G. H.;Lan, C. Z.;Zhu, S. X.;Jacobsen, E.;Zhang, R. F.;Liu, B. W.;Zhao, Z. J.

作者机构：

关键词： Blue_13;China;clonal lineage;genotyping;late blight;population structure

期刊名称：PLANT PATHOLOGY （ 影响因子：2.59； 五年影响因子：2.924 ）

ISSN：

年卷期：

页码：

收录情况： SCI

摘要： The population structure of Phytophthora infestans in China was studied and three mitochondrial haplotypes (Ia, IIa, IIb) were observed. Genetic analysis with 10 highly informative SSR markers identified 68 different genotypes, including three dominant clonal lineages. In the Chinese P. infestans population, the genotypes were strongly clustered according to their geographic origin. One of dominant clonal lineages was genetically similar to Blue_13, a dominant clonal lineage found in Europe since 2004. This is the first report of Blue_13 outside Europe. Only one mating type (A1) was found in the northern and southeastern provinces, but in southern and northwestern China both mating types were observed. The mating type ratio and SSR allele frequencies indicate that in China the sexual cycle of P. infestans is rare. These results emphasize that the migration of asexual propagules and the generation of subclonal variation are the dominant driving factors of the population structure of P. infestans in China. They may also have implications for the role of monitoring P. infestans populations in potato late blight management strategies in China.

分类号： S432.1

  • 相关文献

[1]Population Dynamics of Phytophthora infestans in the Netherlands Reveals Expansion and Spread of Dominant Clonal Lineages and Virulence in Sexual Offspring. Li, Y.,van der Lee, T. A. J.,Evenhuis, A.,van den Bosch, G. B. M.,van Bekkum, P. J.,Forch, M. G.,van Gent-Pelzer, M. P. E.,van Raaij, H. M. G.,Kessel, G. J. T.,Li, Y.,Huang, S. W.,Jacobsen, E.,Vleeshouwers, V. G. A. A.,Govers, F.,Govers, F.. 2012

[2]Association Analysis in Rice: From Application to Utilization. Zhang, Peng,Zhong, Kaizhen,Tong, Hanhua,Shahid, Muhammad Qasim. 2016

[3]Geographical patterns of Toxoplasma gondii genetic diversity revealed by multilocus PCR-RFLP genotyping. Shwab, E. Keats,Majumdar, Debashree,Su, Chunlei,Zhu, Xing-Quan,Su, Chunlei,Pena, Hilda F. J.,Gennari, Solange M.,Dubey, Jitender P.. 2014

[4]New Genotypes of Enterocytozoon bieneusi Isolated from Sika Deer and Red Deer in China. Huang, Jianying,Zhang, Zhenjie,Wang, Rongjun,Zhao, Jinfeng,Jian, Fuchun,Ning, Changshen,Zhang, Longxian,Yang, Yong,Yang, Yong. 2017

[5]Prevalence, risk factors and molecular characterization of Enterocytozoon bieneusi in raccoon dogs (Nyctereutes procyonoides) in five provinces of Northern China. Xu, Chao,Zhang, Xiao-Xuan,Rui-Du,Wang, Quan-Kai,Zhao, Quan,Xu, Chao,Zhang, Hao,Zhao, Jia-Ping,Ba, Heng-Xing,Xing, Xiu Mei,Ma, Xusheng. 2016

[6]Occurrence and multilocus genotyping of Giardia intestinalis assemblage C and D in farmed raccoon dogs, Nyctereutes procyonoides, in China. Zhang, Xiao-Xuan,Zheng, Wen-Bin,Ma, Jian-Gang,Yao, Qiu-Xia,Zou, Yang,Bubu, Cai-Jia,Zhu, Xing-Quan,Zhang, Xiao-Xuan,Zheng, Wen-Bin,Ma, Jian-Gang,Zou, Yang,Bubu, Cai-Jia,Zhao, Quan,Zhu, Xing-Quan,Yao, Qiu-Xia,Zhu, Xing-Quan. 2016

[7]Prevalence and risk factors of Cryptosporidium infection in farmed pigs in Zhejiang, Guangdong, and Yunnan provinces, China. Zou, Yang,Ma, Jian-Gang,Zheng, Wen-Bin,Zhang, Xiao-Xuan,Zhao, Quan,Zou, Yang,Ma, Jian-Gang,Yue, Dong-Mei,Zheng, Wen-Bin,Zhang, Xiao-Xuan,Zhu, Xing-Quan,Yue, Dong-Mei.

[8]The presence of Giardia intestinalis in donkeys, Equus asinus, in China. Zhang, Xiao-Xuan,Zhang, Fu-Kai,Li, Fa-Cai,Hou, Jun-Ling,Zheng, Wen-Bin,Zhu, Xing-Quan,Zhang, Xiao-Xuan,Zhao, Quan,Du, Shuai-Zhi. 2017

[9]Genetic Structure and Eco-Geographical Differentiation of Cultivated Keng Rice (Oryza sativa L. subsp japonica) in China Revealed by Microsatellites. Zhang Dong-ling,Wang Mei-xing,Qi Yong-wen,Sun Jun-li,Wang Feng-mei,Li Jin-jie,Zhang Hong-liang,Li Zi-chao,Wang Mei-xing,Qi Yong-wen,Sun Jun-li. 2012

[10]Population Genetic Analysis of Theileria annulata from Six Geographical Regions in China, Determined on the Basis of Micro- and Mini-satellite Markers. Yin, Fangyuan,Liu, Zhijie,Liu, Junlong,Liu, Aihong,Li, Youquan,Liu, Guangyuan,Luol, Jianxun,Guan, Guiquan,Yin, Hong,Salih, Diaeldin A.,Yin, Hong. 2018

[11]The Phytophthora infestans Avirulence Gene Avr4 Encodes an RXLR- dEER Effector. van Poppel, Pieter M. J. A.,Guo, Jun,de Vondervoort, Peter J. I. van,Jung, Maartje W. M.,Govers, Francine,van Poppel, Pieter M. J. A.,Govers, Francine,Guo, Jun,Guo, Jun,Birch, Paul R. J.,Whisson, Stephen C.. 2008

[12]Phytophthora infestans isolates from Northern China show high virulence diversity but low genotypic diversity. Guo, J.,Govers, F.,Guo, J.,Guo, J.,Govers, F.,Guo, J.,Qu, D. Y.,Xie, K. Y.,Wang, X. W.,van der Lee, T.,Yao, Y. Q.,Gong, X. F.,Liang, D. L..

[13]The potato R10 resistance specificity to late blight is conferred by both a single dominant R gene and quantitative trait loci. Xu, Jianfei,Pang, Wanfu,Bian, Chunsong,Duan, Shaoguang,Liu, Jie,Huang, Sanwen,Jin, Liping,Qu, Dongyu,Wang, Jiajia. 2013

[14]NBS Profiling Identifies Potential Novel Locus from Solanum demissum That Confers Broad-Spectrum Resistance to Phytophthora infestans. Zhang Kun,Xu Jian-fei,Duan Shao-guang,Pang Wan-fu,Bian Chun-song,Liu Jie,Jin Li-ping. 2014

[15]A Host KH RNA-Binding Protein Is a Susceptibility Factor Targeted by an RXLR Effector to Promote Late Blight Disease. Wang, Xiaodan,Qin, Zhiwei,Wang, Xiaodan,Boevink, Petra,Birch, Paul R. J.,Wang, Xiaodan,McLellan, Hazel,Armstrong, Miles,Bukharova, Tatyana,Birch, Paul R. J.,Wang, Xiaodan. 2015

[16]Allelic Diversity of the Population of Phytophthora infestans in China. Li, Ying,Huang, Sanwen,van der Lee, T.,Kessel, G. J. T.,Jacobsen, E.,Zhang, Ruofang,Jin, Guanghui,Lan, Chengzhong,Zhao, Zhijian,Yang, Yanli,Kamoun, S.. 2009

[17]Genetic differentiation in seven geographic populations of the fleshy shrimp Penaeus (Fenneropenaeus) chinensis based on microsatellite DNA. Meng, Xian Hong,Wang, Qing Yin,Liu, Ping,Kong, Jie,Meng, Xian Hong,Jang, In Kwon.

[18]Development of a core set of SNP markers for the identification of upland cotton cultivars in China. Kuang Meng,WEI Shou-jun,WANG Yan-qin,ZHOU Da-yun,MA Lei,FANG Dan,YANG Wei-hua,MA Zhi-ying. 2016

[19]Primary surveys on molecular epidemiology of bovine viral diarrhea virus 1 infecting goats in Jiangsu province, China. Mao, Li,Li, Wenliang,Yang, Leilei,Zhang, Wenwen,Hao, Fei,Jiang, Jieyuan,Wang, Jianhui,Wei, Yong,Cheng, Suping,Wang, Qiusheng,Ding, Yonglong,Sun, Yinhua. 2016

[20]Ovine prion protein genotype frequencies in northwestern China. Zhao, C. -L.,Wu, R.,Liu, L.,Zhang, X. -L.,Wang, C.,Wang, F.,Diao, X. -L.,Guan, H. -W.,Wang, X.,Zhou, L.,Wu, R.,Li, F. -D.. 2012

作者其他论文 更多>>

微信小程序