Linkage map construction using InDel and SSR markers and QTL analysis of heading traits in Brassica oleracea var. capitata L.

文献类型： 外文期刊

第一作者： Lv, Honghao

作者： Lv, Honghao;Wang, Qingbiao;Zhang, Yangyong;Yang, Limei;Fang, Zhiyuan;Wang, Xiaowu;Liu, Yumei;Zhuang, Mu;Lin, Yan;Yu, Hailong;Liu, Bo

作者机构：

关键词： Brassica oleracea;Linkage map;Quantitative trait loci;Heading traits

期刊名称：MOLECULAR BREEDING （ 影响因子：2.589； 五年影响因子：2.75 ）

ISSN：

年卷期：

页码：

收录情况： SCI

摘要： Cabbage heading traits are important quantitative traits that greatly affect both quality and yield of cabbage. However, the genetic control of these traits remains unclear. To detect quantitative trait loci (QTLs) associated with heading traits, a double haploid (DH) population with 196 lines was created from a cabbage hybrid 01-20 x 96-100. A genetic map with insertion-deletion and simple sequence repeat markers was constructed based on the DH population, with a total length of 934.06 cM and average interval length of 2.3 cM between adjacent markers. Field experiments in three seasons were carried out to evaluate the heading traits, including head mature period (Hm), head weight (Hw), core length (Cl), head vertical diameter (Hvd), and the ratio of Cl to Hvd (Cl/Hvd). Using the map and the trait data, 13 reliable QTLs in total were identified and 5 were found in more than one season based on the adjusted means of three seasons. Major QTLs were identified for Hm (R (2) = 40.4, LOD = 14.84), Hw (R (2) = 28.6, LOD = 9.83), Cl (R (2) = 38.8, LOD = 15.73), Hvd (R (2) = 19.2, LOD = 9.26), and Cl/Hvd (R (2) = 38.8, LOD = 12.75). The most significant QTLs were Hm3.1, Cl3.1, and Cl/Hvd3.1, which were detected in three seasons with the maximum contribution rate of almost 40 %. Six active regions that harbored more than one QTL were identified on five chromosomes, and one of them contained major QTLs associated with five traits. The QTLs obtained in this study should be useful for marker-assisted selection in cabbage breeding and for understanding the genetic control of these traits.

分类号： Q94

  • 相关文献

[1]Production and characterization of interspecific somatic hybrids between Brassica oleracea var. botrytis and B. nigra and their progenies for the selection of advanced pre-breeding materials. Wang, Gui-xiang,Tang, Yu,Sheng, Xiao-guang,Hao, Wei-wei,Zhang, Li,Lu, Kun,Liu, Fan,Yan, Hong. 2011

[2]Diversity of Sicilian broccoli (Brassica oleracea var. italica) and cauliflower (Brassica oleracea var. botrytis) landraces and their distinctive bio-morphological, antioxidant, and genetic traits. Branca, Ferdinando,Chiarenza, Giuseppina Laura,Cavallaro, Chiara,Tribulato, Alessandro,Gu, Honghui,Zhao, Zhenqing. 2018

[3]Genetic and Epigenetic Alterations of Brassica nigra Introgression Lines from Somatic Hybridization: A Resource for Cauliflower Improvement. Wang, Gui-xiang,Lv, Jing,Zhang, Jie,Han, Shuo,Zong, Mei,Guo, Ning,Zeng, Xing-ying,Zhang, Yue-yun,Liu, Fan,Lv, Jing,Wang, You-ping,Lv, Jing. 2016

[4]Inheritance and InDel markers closely linked to petal color gene (cpc-1) in Brassica oleracea. Han, Feng-qing,Yang, Chong,Fang, Zhi-yuan,Yang, Li-mei,Zhuang, Mu,Lv, Hong-hao,Liu, Yu-mei,Li, Zhan-sheng,Liu, Bo,Yu, Hai-long,Liu, Xiao-ping,Zhang, Yang-yong.

[5]Genetic analysis and QTL mapping of traits related to head shape in cabbage (Brassica oleracea var. capitata L.). Mang, Xiaoli,Liu, Yumei,Fang, Zhiyuan,Yang, Limei,Zhuang, Mu,Zhang, Yangyong,Li, Zhansheng,Lv, Honghao,Su, Yanbin.

[6]Global analysis of gene expression in flower buds of Ms-cd1 Brassica oleracea conferring male sterility by using an Arabidopsis microarray. Bonnema, Guusje,Kang, Jungen,Zhang, Guoyu,Fang, Zhiyuan,Wang, Xiaowu.

[7]Identification of tapetum-specific genes by comparing global gene expression of four different male sterile lines in Brassica oleracea. Ma, Yuan,Zhu, Yingguo,Ma, Yuan,Wu, Jian,Wang, Xiaowu,Kang, Jungen.

[8]Production and analysis of intergeneric somatic hybrids between Brassica oleracea and Matthiola incana. Sheng, Xiaoguang,Liu, Fan,Zhu, Yuelin,Zhao, Hong,Zhang, Li,Chen, Bin.

[9]Development of InDel markers linked to Fusarium wilt resistance in cabbage. Lv, Hong-hao,Yang, Li-mei,Wang, Qing-biao,Wang, Xiao-wu,Fang, Zhi-yuan,Liu, Yu-mei,Zhuang, Mu,Zhang, Yang-yong,Lin, Yan,Yang, Yu-hong,Xie, Bing-yan,Liu, Bo,Liu, Ji-Sheng,Kang, Jun-gen.

[10]Comparative Analysis of Genome Wide DNA Methylation Profiles for the Genic Male Sterile Cabbage Line 01-20S and Its Maintainer Line. Han, Fengqing,Zhang, Xiaoli,Liu, Xing,Su, Henan,Kong, Congcong,Fang, Zhiyuan,Yang, Limei,Zhuang, Mu,Zhang, Yangyong,Liu, Yumei,Li, Zhansheng,Lv, Honghao,Han, Fengqing,Liu, Xing. 2017

[11]Mapping and analysis of a novel candidate Fusarium wilt resistance gene FOC1 in Brassica oleracea. Lv, Honghao,Fang, Zhiyuan,Yang, Limei,Zhang, Yangyong,Liu, Yumei,Zhuang, Mu,Yang, Yuhong,Xie, Bingyan,Liu, Bo,Liu, Jisheng,Wang, Xiaowu,Wang, Qingbiao,Kang, Jungen. 2014

[12]Bolbase: a comprehensive genomics database for Brassica oleracea. Yu, Jingyin,Zhao, Meixia,Tong, Chaobo,Huang, Shunmou,Tehrim, Sadia,Hua, Wei,Liu, Shengyi,Wang, Xiaowu,Liu, Yumei,Zhao, Meixia. 2013

[13]Assessing and broadening genetic diversity of a rapeseed germplasm collection. Wu, Jinfeng,Li, Feng,Xu, Kun,Cao, Guizhen,Chen, Biyun,Yan, Cuixin,Wang, Nian,Qiao, Jiangwei,Li, Jun,Li, Hao,Zhang, Tianyao,Song, Weiling,Wu, Xiaoming.

[14]Cytogenetic analysis of F-1, F-2 and BC, plants from intergeneric sexual hybridization between Sinapis alba and Brassica oleracea by genomic in situ hybridization. Wei, W. H.,Zhang, S. F.,Wang, L. J.,Li, J.,Chen, B.,Wang, Z.,Luo, L. X.,Fang, X. P.. 2007

[15]Characterization of seedling proteomes and development of markers to distinguish the Brassica A and C genomes. Kong, Fang,Ge, Cailin,Wang, Youping,Fang, Xiaoping,Snowdon, Rod J.. 2010

[16]Study on the Relationship Between the Ploidy Level of Microspore-Derived Plants and the Number of Chloroplast in Stomatal Guard Cells in Brassica oleracea. Yuan Su-xia,Liu Yu-mei,Fang Zhi-yuan,Yang Li-mei,Zhuang Mu,Zhang Yang-yong,Sun Pei-tian. 2009

[17]Development and Validation of High-glucoraphanin Broccoli F-1 Hybrids and Parental Lines. Gu, Honghui,Wang, Jiansheng,Yu, Huifang,Zhao, Zhenqing,Sheng, Xiaoguang,Chen, Jisuan,Xu, Yingjun. 2014

[18]Analysis of intergeneric sexual hybridization between transgenic Brassica oleracea and Sinapis alba. Li, Jun,Wei, Wenhui,Lu, Guangyuan,Li, Jun,Zhang, Chunlei,Luo, Lixia,Ren, Li,Fang, Xiaoping,Guan, Chunyun,Lu, Guangyuan.

[19]Genetics and fine mapping of a yellow-green leaf gene (ygl-1) in cabbage (Brassica oleracea var. capitata L.). Liu, Xiao-ping,Yang, Chong,Han, Feng-qing,Fang, Zhi-yuan,Yang, Li-mei,Zhuang, Mu,Lv, Hong-hao,Liu, Yu-mei,Li, Zhan-sheng,Zhang, Yang-yong,Yang, Chong.

[20]Heritable variation and small RNAs in the progeny of chimeras of Brassica juncea and Brassica oleracea. Li, Junxing,Wang, Yan,Zhang, Langlang,Liu, Bin,Cao, Liwen,Qi, Zhenyu,Chen, Liping,Li, Junxing,Zhang, Langlang,Liu, Bin,Cao, Liwen,Chen, Liping,Wang, Yan,Qi, Zhenyu.

作者其他论文 更多>>

微信小程序