Mitochondrial genetic diversity and population structure of a vulnerable freshwater fish, rock carp (Procypris rabaudi) in upper Yangtze River drainage

文献类型： 外文期刊

第一作者： Zhang, Xiuyue

作者： Zhang, Xiuyue;Yue, Bisong;Song, Zhaobin;Song, Jun;Hou, Feixia;Song, Zhaobin

作者机构：

关键词： Procypris rabaudi;Genetic differentiation;Population structure;mtDNA control region

期刊名称：BIOCHEMICAL SYSTEMATICS AND ECOLOGY （ 影响因子：1.381； 五年影响因子：1.351 ）

ISSN：

年卷期：

页码：

收录情况： SCI

摘要： Rock carp (Procypris rabaudi (Tchang)) is an endemic species in the upper Yangtze River drainage. The genetic variability and population structure of eight populations (Mudong (MD), Hejiang (HJ), Wanzhou (WZ), Xishui (XS), Nantan (NT), Cangxi (CX), Tongjiang (Ti) and Wulong (WL)) were investigated based on mitochondrial DNA control region. According to the river dimensions, MD, HJ, WZ, WL and CX were defined as large river populations, while TJ, XS and NT were defined as small. The total genetic diversity level of rock carp was moderate (h = 0.858, pi = 0.0079). Genetic differentiations among populations in small rivers were greater than those among populations in large rivers, and small rivers showed significant differentiation from large rivers. Analysis from the coalescent-based method showed that there were asymmetric gene flows among four large river populations (CX, HJ, MD and WZ). Demographic analyses suggested that the species as a whole and the WZ population experienced population expansion, while the Hi, NT, and MD populations experienced bottlenecks. The analysis of genetic diversity and population structure suggested that the WL, TJ, CX, NT and XS populations should be protected and managed separately, and that the HJ, MD and WZ populations should be considered as a genetic management unit

分类号： Q5

  • 相关文献

[1]Multi-locus genomic analysis reveals the genetic diversity and population structure of the rock carp (Procypris rabaudi) in the upper Yangtze River. Chang, Lijuan,Wang, Dong,Song, Jun,Chang, Lijuan,Wang, Dong.

[2]Microsatellite markers reveal genetic divergence among wild and cultured populations of Chinese sucker Myxocyprinus asiaticus. Cheng, W. W.,Wang, D. Q.,Wang, C. Y.,Du, H.,Wei, Q. W.,Cheng, W. W.. 2016

[3]Genetic diversity and linkage disequilibrium studies on a 3.1-Mb genomic region of chromosome 3B in European and Asian bread wheat (Triticum aestivum L.) populations. Hao, C. Y.,Perretant, M. R.,Choulet, F.,Wang, L. F.,Paux, E.,Sourdille, P.,Feuillet, C.,Balfourier, Francois,Hao, C. Y.,Wang, L. F.,Zhang, X. Y.,Hao, C. Y.,Wang, L. F.,Zhang, X. Y.,Hao, C. Y.,Wang, L. F.,Zhang, X. Y..

[4]Genetic variation and population structure of the mushroom Pleurotus ferulae in China inferred from nuclear DNA analysis. Zhao Meng-ran,Huang Chen-yang,Wu Xiang-li,Chen Qiang,Qu Ji-bin,Gao Wei,Zhang Jin-xia,Li Yan-chun. 2016

[5]Microsatellite markers reveal genetic diversity of wild soybean in different habitats and implications for conservation strategies (Glycine soja) in China. Wang, Ke-Jing,Li, Xiang-Hu,Yan, Mao-Fen. 2014

[6]Regional-scale differentiation and phylogeography of a desert plant Allium mongolicum (Liliaceae) inferred from chloroplast DNA sequence variation. Zhang, Yinghua,Yu, Qiushi,Hu, Xiaoke,Hu, Jing,Fan, Baoli,Yu, Qiushi,Zhang, Qian.

[7]High occurrence of mitochondrial heteroplasmy in nepalese indigenous sheep (Ovis aries) compared to Chinese sheep. Gorkhali, Neena Amatya,Jiang, Lin,He, Xiao-Hong,Qian Junzhao,Han, Jian-Lin,Ma, Yue-Hui,Gorkhali, Neena Amatya,Shrestha, Bhola Shankar,Han, Jian-Lin.

[8]Sequence and analysis of mtDNA control region in Cnaphalacrocis medinalis Guenee and Marasmia patnalis Bradley (Lepidoptera: Pyralidae). Yang, Yajun,Wu, Zhihong,Xu, Hongxing,Zheng, Xusong,Tian, Junce,Lu, Zhongxian,Wu, Zhihong.

[9]Genetic differentiation of Bemisia tabaci (Gennadius) (Hemiptera : Aleyrodidae) biotype Q based on mitochondrial DNA markers. Chu, Dong,Tao, Yun-Li,Liu, Guo-Xia,Fan, Zhong-Xue,Bi, Yu-Ping,Wan, Fang-Hao. 2008

[10]Cytoplasmic diversity of the cotton genus as revealed by chloroplast microsatellite markers. Li, Pengbo,Hua, Jinping,Li, Pengbo,Liu, Huimin,Li, Zhaohu,Hua, Jinping. 2014

[11]Genome-wide analysis of maize NLP transcription factor family revealed the roles in nitrogen response. Ge, Min,Jiang, Lu,Wang, Yuancong,Lv, Yuanda,Zhou, Ling,Liang, Shuaiqiang,Bao, Huabin,Zhao, Han,Liu, Yuhe. 2018

[12]Diversity analysis of the developed qingke (hulless barley) cultivars representing different growing regions of the Qinghai-Tibet Plateau in China using sequence-related amplified polymorphism (SRAP) markers. Liu, Xianjun,Liu, Xinchun,Feng, Zongyun,Yang, Ping,Yang, Wuyun,Yang, Ping,Liu, Xianjun,Liu, Xinchun,Feng, Zongyun. 2010

[13]Selection pressures have driven population differentiation of domesticated and wild common carp (Cyprinus carpio L.). Xu, L. H.,Wang, C. H.,Wang, J.,Ma, Y. Q.,Yang, X. X.,Dong, Z. J.. 2012

[14]Genetic diversity and relationship of Mauremys mutica and M-annamensis assessed by DNA barcoding sequences. Zhao, Jian,Li, Wei,Wen, Ping,Zhang, Dandan,Zhu, Xinping,Zhao, Jian,Wen, Ping. 2016

[15]The loss of genetic diversity during captive breeding of the endangered sculpin, Trachidermus fasciatus, based on ISSR markers: implications for its conservation. Bi Xiaoxiao,Yang Qiaoli,Gao Tianxiang,Li Chuangju. 2011

[16]Genetic differentiation among common and selected hatchery populations of founder: Evidence from RAPD markers. Liu, Yun-Guo,Chen, Song-Lin,Li, Ba-Fang. 2007

[17]Genetic characterization of three breeds of high royal jelly producing honeybee (Apis mellifera ligustica) in China. Yin, Ling,Ji, Ting,Chen, Guohong,Peng, Wenjun. 2011

[18]Morphological characteristics and DNA barcoding of Pampus echinogaster (Basilewsky, 1855). Li, Yuan,Lin, Longshan,Zhang, Yan,Gao, Tianxiang,Han, Zhiqiang,Zhang, Xiumei. 2017

[19]Genetic variation in wild and cultured populations of the pearl oyster Pinctada fucata from southern China. Yu, Da Hui,Chu, Ka Hou. 2006

[20]TaGW2, a Good Reflection of Wheat Polyploidization and Evolution. Qin, Lin,Zhang, Xueyong,Qin, Lin,Zhang, Xueyong,Qin, Lin,Zhao, Junjie,Li, Tian,Hou, Jian,Zhang, Xueyong,Hao, Chenyang. 2017

作者其他论文 更多>>

微信小程序