Development of 27 novel cross-species microsatellite markers for the endangered Hucho bleekeri using next-generation sequencing technology

文献类型： 外文期刊

第一作者： Wang, Ke

作者： Wang, Ke;Wei, Qiwei;Zhang, Shuhuan;Wang, Dengqiang;Xin, Miaomiao;Wu, Jinming;Sun, Qingliang;Du, Hao;Wang, Chengyou;Huang, Jun;Wei, Qiwei

作者机构：

关键词： Hucho bleekeri;Microsatellite;Endangered species

期刊名称：CONSERVATION GENETICS RESOURCES （ 影响因子：0.973； 五年影响因子：0.946 ）

ISSN：

年卷期：

页码：

收录情况： SCI

摘要： In this study, we developed 27 polymorphic microsatellite loci in Hucho bleekeri, a glacial relict and freshwater resident salmonid fish in China. The number of alleles varied from 2 to 8 for each primer set. The observed and expected heterozygosity ranged from 0.250 to 0.906 and 0.508 to 0.845, respectively. The polymorphic information content ranged from 0.371 to 0.808. These microsatellite loci should be useful to study population genetics, paternity identification, speciation and adaptive evolution of this lineage.

分类号： Q1

  • 相关文献

[1]The complete mitochondrial genome of the Endangered Hucho bleekeri ( Salmonidae: huchen). Zhang, Shuhuan,Wei, Qiwei,Du, Hao,Li, Luoxin. 2016

[2]The complete mitochondrial genome of the Sichuan taimen (Hucho bleekeri): Repetitive sequences in the control region and phylogenetic implications for Salmonidae. Du, Jun,Wang, Ying,Guo, Rui,Zhang, Xiuyue,Song, Zhaobin.

[3]Genetic diversity of the endangered scaly-sided merganser (Mergus squamatus) in the wintering habitat of central-southern China. Zhang, Z-Q,Wang, A-P,Luo, C-H,Qin, C-J,Fang, D-A,Liu, K.. 2013

[4]Complete mitochondrial genome of the Freshwater Catfish Rita rita (Siluriformes, Bagridae). Lashari, Punhal,Deng, Yulin,Lashari, Punhal,Laghari, Muhammad Younis,Xu, Peng,Zhao, Zixia,Jiang, Li,Sun, Xiaowen,Zhang, Yan,Lashari, Punhal,Laghari, Muhammad Younis,Narejo, Naeem Tariq. 2015

[5]Complete mitochondrial genome of burbot (Lota lota: family Gadidae) from Amur basin lineage, Northeastern China. Lashari, Punhal,Laghari, Muhammad Younis,Xu, Peng,Zhao, Zi-Xia,Jiang, Li,Sun, Xiao-Wen,Zhang, Yan. 2016

[6]Complete mitochondrial genome of catfish Bagarius bagarius (Hamilton, Sisoridae; Siluriformes) from Indus River Sindh, Pakistan. Lashari, Punhal,Deng, Yulin,Lashari, Punhal,Laghari, Muhammad Younis,Xu, Peng,Zhao, Zixia,Jiang, Li,Sun, Xiaowen,Zhang, Yan,Lashari, Punhal,Laghari, Muhammad Younis,Narejo, Naeem Tariq.

[7]Isolation and characterization of eleven novel microsatellite loci of Brachymystax lenok tsinlingensis, a threatened fish endemic to Shaanxi, China. Liu, Haixia,Li, Yang,Liu, Xiaolin,Zou, Guiwei,Wei, Qiwei,Zou, Guiwei,Wei, Qiwei,Zou, Guiwei,Wei, Qiwei. 2013

[8]The complete mitochondrial genome of Marco Polo wild sheep (Ovis ammon polii). Gan, Shang-Quan,Xu, Meng-Si,Meng, Ji-Meng,Tang, Hong,Wang, Xinhua,Wang, Limin,Zhou, Ping,Li, Ji,Yuan, Wuzhou. 2016

[9]Comparative protein profiles: Potential molecular markers from spermatozoa of Acipenseriformes (Chondrostei, Pisces). Li, Ping,Hulak, Martin,Rodina, Marek,Li, Zhi-Hua,Linhart, Otomar,Li, Ping,Li, Zhi-Hua,Sulc, Miroslav.

[10]Genetic diversity in Chinese sorghum landraces revealed by chloroplast simple sequence repeats. Li, Ruyu,Zhang, Chunqing,Li, Ruyu,Zhang, Han,Guan, Yanan,Yao, Fengxia,Song, Guoan,Wang, Jiancheng,Zhou, Xincheng.

[11]Development of microsatellite markers for genetic diversity analysis of Dendrobium loddigesii Rolfe, an endangered orchid in China. Cai, Xiaoyan,Feng, Zhenyu,Hou, Beiwei,Xing, Wenrui,Ding, Xiaoyu,Cai, Xiaoyan.

[12]A genetic linkage map and comparative genome analysis of common carp (Cyprinus carpio L.) using microsatellites and SNPs. Zheng, Xianhu,Kuang, Youyi,Zhang, Xiaofeng,Lu, Cuiyun,Cao, Dingchen,Li, Chao,Sun, Xiaowen,Zheng, Xianhu. 2011

[13]Polymorphism of microsatellite sequence within ABC transporter genes in phytopathogenic fungus, Magnaporthe grisea. Li, Jinbin,Liu, Lin,Li, Chengyun,Yang, Jing,Su, Yuan,Wang, Yunyue,Xie, Yong,Zhu, Youyong. 2008

[14]Development of microsatellite markers for Leptobotia rubrilaris, a threatened fish species in the Yangtze River. Duan, Xin Bin,Chen, Da Qing,Liu, Hong Yan,Xiong, Fei. 2013

[15]Conservation genetics in Chinese sheep: diversity of fourteen indigenous sheep (Ovis aries) using microsatellite markers. E, Guang-Xin,Zhao, Yong-Ju,Zhang, Jia-Hua,Huang, Yong-Fu,Zhong, Tao,Ma, Yue-Hui,Gao, Hui-Jiang,He, Jian-Ning,Liu, Nan. 2016

[16]Isolation and analysis of microsatellites in the genome of turbot (Scophthalmus maximus L.). Ruan, Xiaohong,Hu, Jingjie,Ruan, Xiaohong,Wang, Weiji,Kong, Jie. 2011

[17]Genetic variation and population structure of the oriental fruit moth Grapholita molesta in Shanxi, a major pome fruits growing region in North China. Yang, Jing,Liu, Zhong-Fang,Fan, Ji-Qiao,Fan, Ren-Jun,Yang, Jing,Liu, Zhong-Fang,Fan, Ji-Qiao,Fan, Ren-Jun,Wu, Yu-Peng,Ma, Rui-Yan. 2016

[18]Polymorphic microsatellite loci for population studies of the Japanese scallop, Patinopecten yessoensis. Zhao, Ying-Ying,Zhu, Xiao-Chen,Sun, Xiao-Wen,Liang, Li-Qun. 2007

[19]Selection pressures have driven population differentiation of domesticated and wild common carp (Cyprinus carpio L.). Xu, L. H.,Wang, C. H.,Wang, J.,Ma, Y. Q.,Yang, X. X.,Dong, Z. J.. 2012

[20]Isolation and Characterization of New 24 Microsatellite DNA Markers for Golden Cuttlefish (Sepia esculenta). Yuan, Yanjiao,Liu, Shufang,Bai, Cuicui,Liu, Hongbo,Zhuang, Zhimeng,Yuan, Yanjiao,Bai, Cuicui,Liu, Hongbo. 2012

作者其他论文 更多>>

微信小程序