Identification and expression dynamics of three WUSCHEL related homeobox 13 (WOX13) genes in peanut

文献类型: 外文期刊

第一作者: Wang, Pengfei

作者: Wang, Pengfei;Li, Changsheng;Li, Cui;Zhao, Chuanzhi;Xia, Han;Zhao, Shuzhen;Hou, Lei;Gao, Chao;Wan, Shubo;Wang, Xingjun;Wang, Pengfei;Li, Changsheng;Li, Cui;Zhao, Chuanzhi;Xia, Han;Zhao, Shuzhen;Hou, Lei;Gao, Chao;Wan, Shubo;Wang, Xingjun

作者机构:

关键词: Peanut;WOX13 subfamily gene;Stem cell;Evolution;Selective pressure

期刊名称:DEVELOPMENT GENES AND EVOLUTION ( 影响因子:0.9; 五年影响因子:2.395 )

ISSN:

年卷期:

页码:

收录情况: SCI

摘要: WUSCHEL-related homeobox (WOX) genes play key roles in plant stem cell maintenance and development. WOX genes showed specific expression patterns which are important for their functions. WOX13 subfamily genes as the ancestor genes of this family were less studied in the past. In this study, we cloned three Arachis hypogaea (peanut) WOX13 (AhWOX13) subfamily genes from peanut: WOX13A and WOX13B1, 2. WOX13B1 encoded a same protein as WOX13B2, and there were only two-base difference between these two genes. Differential expression patterns were observed for these three AhWOX13 subfamily genes in different tissues and developmental stages. Phylogenic trees analysis showed that these AhWOX13 subfamily genes were the most conserved WOX genes and belonged to the ancient clade of WOX family. This was also supported by the conserved motif analysis. Selective pressure analysis showed that the WOX family genes mainly underwent weak purifying selection (omega = 0.58097), while many positive mutations accumulated during the evolution history. Under the purifying selection, gene duplication event and loss of duplicated gene play important roles in the expansion and evolution of WOX family.

分类号: Q1

  • 相关文献

[1]Genome-Wide Dissection of the Heat Shock Transcription Factor Family Genes in Arachis. Wang, Pengfei,Song, Hui,Li, Changsheng,Li, Pengcheng,Li, Aiqin,Guan, Hongshan,Hou, Lei,Wang, Xingjun,Wang, Xingjun. 2017

[2]Molecular characterization, origin, and evolution of teleost p68 gene family: Insights from Japanese flounder, Paralichthys olivaceus. Wang, Zhongkai,Wang, Zhongkai,Liu, Wei,Zhou, Nayu,Wang, Huizhen,Li, Peizhen,Wang, Mengxun,Zhang, Quanqi.

[3]Immortalized bovine mammary epithelial cells express stem cell markers and differentiate in vitro. Hu, Han,Zheng, Nan,Hu, Han,Gao, Haina,Dai, Wenting,Zhang, Yangdong,Li, Songli,Wang, Jiaqi.

[4]A Short Review: Research progress of bovine stem cells. Gao, Y-H.,Guan, W-J.,Ma, Y-H.,Gao, Y-H..

[5]Deer antler - A novel model for studying organ regeneration in mammals. Li, Chunyi,Zhao, Haiping,Liu, Zhen,Li, Chunyi,Zhao, Haiping,Liu, Zhen,McMahon, Chris.

[6]CLE Peptides in Plants: Proteolytic Processing, Structure-Activity Relationship, and Ligand-Receptor Interaction. Gao, Xiaoming,Guo, Yongfeng. 2012

[7]Transgenic Expression and Identification of Recombinant Human Proinsulin in Peanut. Zheng Ling,Wang Yu,Wan Shu-Bo,Peng Zhen-Ying,Bi Yu-Ping,Zheng Ling,Wang Yu,Bian Fei,Wan Shu-Bo,Peng Zhen-Ying,Zheng Ling,Wang Yu,Bian Fei,Wan Shu-Bo,Peng Zhen-Ying,Bi Yu-Ping,Jiao Qi-Qing,Qu Shu-Jie,Wan Shu-Bo,Bi Yu-Ping. 2016

[8]Transcriptome Analysis of Calcium and Hormone-Related Gene Expressions during Different Stages of Peanut Pod Development. Li, Yan,Meng, Jingjing,Yang, Sha,Guo, Feng,Zhang, Jialei,Geng, Yun,Cui, Li,Li, Xinguo,Wan, Shubo. 2017

[9]Calcium contributes to photoprotection and repair of photosystem II in peanut leaves during heat and high irradiance. Yang, Sha,Wang, Fang,Guo, Feng,Meng, Jing-Jing,Li, Xin-Guo,Yang, Sha,Guo, Feng,Meng, Jing-Jing,Li, Xin-Guo,Wan, Shu-Bo,Wang, Fang. 2015

[10]Cloning of Acyl-ACP thioesterase FatA from Arachis hypogaea L. and its expression in Escherichia coli. Chen, G.,Peng, Z. Y.,Xuan, N.,Zhang, Y.,Bi, Y. P.,Chen, G.. 2012

[11]Genome-Wide Identification and Comparative Analysis of Cytosine-5 DNA Methyltransferase and Demethylase Families in Wild and Cultivated Peanut. Wang, Pengfei,Gao, Chao,Bian, Xiaotong,Zhao, Shuzhen,Zhao, Chuanzhi,Xia, Han,Song, Hui,Hou, Lei,Wan, Shubo,Wang, Xingjun. 2016

[12]Peanut (Arachis hypogaea L.) Omics and Biotechnology in China. Wang, Xing-Jun,Xia, Han,Wan, Shu-Bo,Zhao, Chuan-Zhi,Li, Ai-Qin,Wang, Xing-Jun,Xia, Han,Wan, Shu-Bo,Zhao, Chuan-Zhi,Li, Ai-Qin,Wang, Xing-Jun,Xia, Han,Wan, Shu-Bo,Zhao, Chuan-Zhi,Li, Ai-Qin,Liu, Shuan-Tao. 2011

[13]Identification of Metabolites and Transcripts Involved in Salt Stress and Recovery in Peanut. Cui, Feng,Liu, Yiyang,Han, Yan,Wan, Shubo,Li, Guowei,Cui, Feng,Liu, Yiyang,Han, Yan,Wan, Shubo,Li, Guowei,Sui, Na,Liu, Shanshan,Duan, Guangyou. 2018

[14]Small RNA profiling and degradome analysis reveal regulation of microRNA in peanut embryogenesis and early pod development. Gao, Chao,Wang, Pengfei,Zhao, Shuzhen,Zhao, Chuanzhi,Xia, Han,Hou, Lei,Zhang, Ye,Li, Changsheng,Wang, Xingjun,Wang, Xingjun,Ju, Zheng. 2017

[15]Comparative proteomics of peanut gynophore development under dark and mechanical stimulation. Sun, Yong,Wang, Qingguo,Li, Zhen,Hou, Lei,Liu, Wei,Dai, Shaojun,Sun, Yong.

[16]Transcriptome and Differential Expression Profiling Analysis of the Mechanism of Ca2+ Regulation in Peanut (Arachis hypogaea) Pod Development. Yang, Sha,Zhang, Jialei,Geng, Yun,Guo, Feng,Meng, Jingjing,Li, Xinguo,Li, Lin,Wang, Jianguo,Sui, Na,Wan, Shubo. 2017

[17]Identification of chilling-responsive transcripts in peanut (Arachis hypogaea L.). Wang, Chuan Tang,Wang, Xiu Zhen,Chi, Xiao Yuan,Wu, Qi,Chen, Dian Xu,Tang, Yue Yi,Yang, Guan Pin,Feng, Tong,Gao, Hua Yuan,Xu, Ya Long. 2011

[18]Physiological fundamentals of the AnM cultivation technique in peanut production: Leaf photosynthetic hysteresis is reduced by exposing hypocotyls. Qin, Feifei,Takano, Tetsuo,Qin, Feifei,Xu, Hui-lian,Qin, Feifei. 2012

[19]Functional Genomic Analysis of Aspergillus flavus Interacting with Resistant and Susceptible Peanut. Wang, Houmiao,Lei, Yong,Yan, Liying,Wan, Liyun,Ren, Xiaoping,Chen, Silong,Jiang, Huifang,Liao, Boshou,Wang, Houmiao,Lei, Yong,Yan, Liying,Wan, Liyun,Ren, Xiaoping,Chen, Silong,Jiang, Huifang,Liao, Boshou,Dai, Xiaofeng,Guo, Wei. 2016

[20]The effect of low water content on seed longevity. Hu, CL,Zhang, YL,Tao, M,Hu, XR,Jiang, CY. 1998

作者其他论文 更多>>