The High-throughput sequencing of Sillago japonica mitochondrial genome reveals the phylogenetic position within the genus Sillago

文献类型： 外文期刊

第一作者： Niu, Sufang

作者： Niu, Sufang;Wu, Renxie;Wang, Xuefeng;Liu, Yong

作者机构：

关键词： High-throughput sequencing technology;mitogenome;Sillago japonica

期刊名称：MITOCHONDRIAL DNA PART A （ 影响因子：1.514； 五年影响因子：0.707 ）

ISSN：

年卷期：

页码：

收录情况： SCI

摘要： The complete mitogenome of Sillago japonica was determined through high-throughput DNA sequencing technology. The circular mtDNA molecule was 16645 bp in size and encoded 13 protein-coding genes, 2 rRNAs, 22 tRNAs and 2 non-coding regions, with the genearrangement and content identical to other typical vertebrate mitogenomes. The identity analysis revealed that the mitogenome sequence of 5. japonica shared a relatively high sequence identity to S. asiatica (81.5%) compared with 5. aeolus (77.5%), S. indica (77.1%), and 5. sihama (76.3%). The neighbor-joining tree of complete mitogenome sequence showed that S. japonica firstly clustered together with S. asiatica, then grouped with S. indica and 5. sihama, and finally gathered with S. aeolus. Taken together, the results absolutely supported the evolutionary position of S. japonica and provided new insights into phylogenetic relationships of Sillago.

分类号： Q7

  • 相关文献

[1]Characterization of microbial community in high-pressure treated oysters by high-throughput sequencing technology. Cao Rong,Zhao Ling,Sun Huihui,Liu Qi. 2018

[2]Mitochondrial DNA sequence of Pseudorasbora parva ( Cyprinidae: Gobioninae). Xu, Wei,Geng, Long-Wu,Xu, Min,Tong, Guang-Xiang,Jiang, Hai-Feng,Xu, Min. 2016

[3]The complete mitochondrial genome sequence of Hemibagrus sp. (Siluriformes: Bagridae), molecular data for species identification. Zhou, Can-Lin,Zhou, Can-Lin,Tian, Juan,Yang, Chang-Geng. 2016

[4]Complete mitochondrial genome sequence of tarim red deer (Cervus elaphus yarkandensis). Shao, Yuanchen,Xing, Xiumei,Zha, Daiming,Yang, Fuhe. 2016

[5]Complete mitochodrial genome of the redlip loach Leptobotia rubrilaris (Teleostei, Cypriniformes: Cobitidae). Tian, Hui-Wu,Wang, Deng-Qiang,Jia, Xiang-Yang,Duan, Xin-Bin,Chen, Da-Qing,Jia, Xiang-Yang. 2015

[6]The mitogenome of Liobagrus marginatoides (Teleostei, Siluriformes:Amblycipitidae). Jia, Xiang-Yang,Wang, Deng-Qiang,Tian, Hui-Wu,Xiong, Xing,Li, Shu-Hua,Chen, Da-Qing,Jia, Xiang-Yang,Li, Ying-Wen,Xiong, Xing,Jia, Xiang-Yang,Tu, Bin. 2013

[7]Description of the mitochondrial genome of yellowtail scad Atule mate (Perciformes: Carangidae). Li, Min,Li, Yufang,Chen, Zuozhi,Li, Min,Li, Yufang,Chen, Zuozhi. 2016

[8]Complete mitochondrial genome of sterlet (Acipenser ruthenus). Li, Chao,Wang, Yany,Li, Chao,Cheng, Lei,Lu, Cui-Yun,Sun, Xiao-Wen,Li, Jiong-Tang,Sun, Xiao-Wen. 2015

[9]Complete mitochondrial genome of the smallscale yellowfin, Plagiognathops microlepis (Teleostei: Cypriniformes: Cyprinidae). Hu, Ying-Xiong,Zhou, Qiao,Song, Yong,Li, Yun,Chen, Da-Qing. 2015

[10]The phylogenomic position of the smalleye whip ray Himantura microphthalma (Myliobatiformes: Dasyatidae) inferred from the mitochondrial genome. Wang, Junjie,Si, Ranran,Chen, Hao,Chen, Xiao. 2016

[11]The complete mitochondrial genome sequence of Tor sinensis (Cypriniformes, Cyprinidae). Huang, Fujiang,Liu, Mingdian,Ye, Chao,Liu, Shaoping,Ye, Chao. 2015

[12]Complete mitogenome of Nemacheilus subfusca (Cypriniformes: Cobitidae). Zhou, Jianshe,Gong, Junhua,Li, Baohai,Ma, Bo,Li, Lei. 2016

[13]The complete mitogenome sequence of Ptychobarbus dipogon (Cypriniformes: Cyprinidae). Zhang, Gui-Rong,Ji, Wei,Wei, Kai-Jian,Guo, Xiang-Zhao,Xie, Cong-Xin,Zhang, Gui-Rong,Ji, Wei,Wei, Kai-Jian,Guo, Xiang-Zhao,Shi, Ze-Chao,Wei, Qi-Wei. 2015

[14]The complete mitochondrial genome of Alburnus chalcoides aralensis. Geng, Longwu,Jiang, Haifeng,Yang, Jian,Xu, Min,Xu, Wei,Yang, Jian,Xu, Min. 2015

[15]Sequencing and characterization of mitochondrial genome of Fusarium sp (Hypocreales: Nectriaceae). Lu, Daihua,Chen, Cheng,Bi, Guiqi. 2017

[16]The complete mitochondrial genome of the rice moth, Corcyra cephalonica. Wu, Yu-Peng,Zhao, Jin-Liang,Su, Tian-Juan,Luo, A-Rong,Wu, Chun-Sheng,Zhu, Chao-Dong,Li, Jie,Wu, Yu-Peng,Su, Tian-Juan,Fan, Ren-Jun,Wu, Yu-Peng. 2012

[17]Complete mitochondrial genome of the Japanese pine sawyer, Monochamus alternatus (Coleoptera: Cerambycidae). Li, Fengbo,Zhang, Huixian,Wang, Wei,Weng, Hongbiao,Meng, Zhiqi,Zhang, Huixian,Wang, Wei. 2016

[18]Complete mitochondrial genome of the black-dotted grouper Epinephelus stictus. Ye, Le,Du, Fei-Yan,Wang, Xue-Hui,Wang, Yu,Ye, Le,Du, Fei-Yan,Wang, Xue-Hui.

[19]Construction and initial analysis of five Fosmid libraries of mitochondrial genomes of cotton (Gossypium). Li ShuangShuang,Liu GuoZheng,Chen ZhiWen,Li PengBo,Hua JinPing,Wang YuMei,Li PengBo. 2013

[20]Characterization of the mitochondrial genome and phylogeny of the black arowana (Osteoglossum ferreirai). Mu, Xidong,Liu, Yi,Wang, Xuejie,Liu, Chao,Song, Hongmei,Hu, Yinchang,Luo, Jianren.

作者其他论文 更多>>

微信小程序