The complete chloroplast genome sequence of Corylus chinensis Franch

文献类型: 外文期刊

第一作者: Hu, Guanglong

作者: Hu, Guanglong;Cheng, Lili;Lan, Yanping;Cao, Qingchang;Huang, Wugang

作者机构:

关键词: Chloroplast genome;Corylus chinensis;Illumina sequencing;Phylogenetic analysis

期刊名称:CONSERVATION GENETICS RESOURCES ( 影响因子:0.973; 五年影响因子:0.946 )

ISSN:

年卷期:

页码:

收录情况: SCI

摘要: This study aimed to map and determine the complete chloroplast genome sequence of a rare Betulaceae species, Corylus chinensis Franch., on the basis of the Illumina sequencing data. The complete chloroplast genome is 159,915 bp, and comprises a pair of inverted repeat regions of 26,989 bp each, a large single-copy region of 88,115 bp, and a small single-copy region of 17,822 bp. It harbors 132 genes, including 95 proteincoding genes, 8 rRNA genes, and 29 transfer RNA genes. The overall A+T content of the whole genome is 63.51 %. A phylogenetic analysis based on chloroplast genomes has indicated that C. chinensis Franch. is closely related to Ostrya rehderiana.

分类号: Q1

  • 相关文献

[1]The complete chloroplast genome sequence of the endangered Chinese endemic tree Corylus fargesii. Hu, Guanglong,Cheng, Lili,Lan, Yanping,Cao, Qingchang,Huang, Wugang,Wang, Xueqiang.

[2]Comparative Analysis of the Complete Chloroplast Genome of Four Endangered Herbals of Notopterygium. Jiao Yang,Li, Zhong-Hu,Ma, Xiong-Feng,Ming Yue,Chuan Niu,Xiong-Feng Ma,Zhong-Hu Li. 2017

[3]Complete Chloroplast Genome Sequence of Aquilaria sinensis (Lour.) Gilg and Evolution Analysis within the Malvales Order. Wang, Ying,Mei, Wen-Li,Dai, Hao-Fu,Chen, Xiong-Ting,Peng, Shi-Qing,Zhan, Di-Feng,Jia, Xian. 2016

[4]The complete chloroplast genome sequence and phylogenetic analysis of Chuanminshen (Chuanminshenviolaceum Sheh et Shan). Zhong, Wenjuan,Mou, Fangsheng,Gong, Yiyun,Pu, Deqiang,Ji, Peicheng,Huang, Haiyan,Yang, Zehu,Zhang, Chao.

[5]Comparative Bioinformatics Analysis of the Chloroplast Genomes of a Wild Diploid Gossypium and Two Cultivated Allotetraploid Species. Farshid Talat ,Kunbo Wang. 2015

[6]Genetic variability among the chloroplast genomes of sugarcane (Saccharum spp) and its wild progenitor species Saccharum spontaneum L.. Lu, X.,Zhou, H.,Pan, Y. -B.. 2014

[7]Progress in chloroplast genome analysis. Liu, Clarke Jihong,Xing Shao-Chen. 2008

[8]The complete chloroplast genome sequence of the wild cucumber Cucumis hystrix Chakr. (Cucumis, cucurbitaceae). Wu, Zhiming,Jia, Li,Shen, Jia,Qian, Chuntao,Lou, Qunfeng,Li, Ji,Chen, Jinfeng,Jiang, Biao. 2016

[9]The complete chloroplast genome of Arabidopsis lyrata. Wu, Zhiqiang,Gu, Cuihua,Tembrock, Luke R.,Sun, Cheng. 2016

[10]Molecular Analysis of the Genetic Diversity of Chinese Hami Melon and Its Relationship to the Melon Germplasm from Central and South Asia. Long, Bo,Long, Chunlin,Aierken, Yasheng,Akashi, Yukari,Phan Thi Phuong Nhi,Halidan, Yikeremu,Nishida, Hidetaka,Kato, Kenji,Aierken, Yasheng,Wu, Min Zhu,Tanaka, Katsunori. 2011

[11]Complete chloroplast genome sequence of rapeseed (Brassica napus L.) and its evolutionary implications. Hu, Zhi-Yong,Hua, Wei,Huang, Shun-Mou,Wang, Han-Zhong,Hu, Zhi-Yong,Hua, Wei,Huang, Shun-Mou,Wang, Han-Zhong.

[12]Assessing high-resolution melt curve analysis for accurate detection of DNA polymorphisms in the chloroplast gene accD of Crucifer species. Yan, Gui-xin,Wu, Xiao-ming,Li, Dan,Zeng, Chang-li,Lv, Pei-jun,Gao, Gui-zhen,Chen, Bi-yun,Xu, Kun,Lv, Xiao-dan,Zeng, Chang-li.

[13]A Phylogenetic Analysis of Chloroplast Genomes Elucidates the Relationships of the Six Economically Important Brassica Species Comprising the Triangle of U. Li, Peirong,Zhang, Shujiang,Li, Fei,Zhang, Shifan,Zhang, Hui,Wang, Xiaowu,Sun, Rifei,Li, Peirong,Bonnema, Guusje,Borm, Theo J. A.. 2017

[14]The complete chloroplast genome sequence of the Citrullus colocynthis L. (Cucurbitaceae). Zhu, Qianglong,Zhang, Muyue,Cui, Haonan,Fan, Chao,Gao, Peng,Wang, Xuezheng,Luan, Feishi,Zhu, Qianglong,Zhang, Muyue,Cui, Haonan,Gao, Peng,Wang, Xuezheng,Luan, Feishi,Fan, Chao. 2017

[15]Chloroplast DNA markers for Echinochloa taxa. Zhang, J-P,Lu, Y-L,Fu, F.,Liu, C.,Lin, Z-X,Wang, Y-Y,Ye, C-Y. 2017

[16]Sequencing of chloroplast genome using whole cellular DNA and Solexa sequencing technology. Wu, Jian,Liu, Bo,Cheng, Feng,Wang, Xiao-Wu,Ramchiary, Nirala,Choi, Su Ryun,Lim, Yong Pyo. 2012

[17]The complete chloroplast genome sequence of Chinese wild grape Vitis amurensis (Vitaceae: Vitis L.). Xie, Haikun,Jiao, Jian,Fan, Xiucai,Zhang, Ying,Jiang, Jianfu,Sun, Haisheng,Liu, Chonghuai.

[18]The complete chloroplast genome of Lilium cernuum: genome structure and evolution. Du, Yunpeng,Chen, Xuqing,Yang, Fengping,Xue, Jing,Zhang, Xiuhai,Du, Yunpeng,Chen, Xuqing,Yang, Fengping,Xue, Jing,Bi, Yu.

[19]Diversification and genetic differentiation of cultivated melon inferred from sequence polymorphism in the chloroplast genome. Tanaka, Katsunori,Akashi, Yukari,Nishida, Hidetaka,Kato, Kenji,Fukunaga, Kenji,Yamamoto, Tatsuya,Aierken, Yasheng,Long, Chun Lin,Yoshino, Hiromichi,Sato, Yo-Ichiro.

[20]The complete chloroplast genome sequence of sugar beet (Beta vulgaris ssp vulgaris). Li, Han,Huang, Xing-Qi,Li, Han,Cao, Hua,Cai, Yan-Fei,Wang, Ji-Hua,Qu, Su-Ping,Huang, Xing-Qi,Li, Han,Cao, Hua,Cai, Yan-Fei,Wang, Ji-Hua,Qu, Su-Ping,Huang, Xing-Qi,Li, Han,Cao, Hua,Cai, Yan-Fei,Wang, Ji-Hua,Qu, Su-Ping,Huang, Xing-Qi,Li, Han,Cao, Hua,Cai, Yan-Fei,Wang, Ji-Hua,Qu, Su-Ping,Huang, Xing-Qi.

作者其他论文 更多>>