Single-cell RNA-seq reveals the effects of the FecB mutation on the transcriptome profile in ovine cumulus cells
文献类型: 外文期刊
第一作者: Guo, Xiaofei
作者: Guo, Xiaofei;Zhong, Rongzhen;Guo, Xiaofei;Zhang, Jinlong;Dong, Chunxiao;Wang, Biao;Liu, Yu;Zhang, Xiaoshen;Wang, Xiangyu;Chu, Mingxing;Fang, Yi;Liang, Rong
作者机构:
关键词: Single-cell RNA-seq; Cumulus cells; Follicle; FecB; Sheep
期刊名称:SCIENTIFIC REPORTS ( 影响因子:3.8; 五年影响因子:4.3 )
ISSN: 2045-2322
年卷期: 2024 年 14 卷 1 期
页码:
收录情况: SCI
摘要: Genetic variations in the ovine ovulation rate, which are associated with the FecB mutation, provide useful models by which to explore the mechanisms regulating the development of mammalian antral follicles. In order to study the effects of the FecB mutation on cumulus cell differentiation, preovulatory follicles were aspirated and cumulus cells were isolated from three FecB genotypes (homozygous, heterozygous and wild type) of Small Tail Han (STH) sheep superstimulated with FSH. Transcriptome information from tens of thousands of cumulus cells was determined with the 10 x Genomics single-cell RNA-seq technology. Under the superovulation treatment, the observed number of preovulatory follicles in the ovaries of FecB carriers was still significantly higher than that in the wild-type (P < 0.05). The expression patterns of cumulus cells differed between FecB carriers and wild-type ewes. The screened cumulus cells could also be further divided into different cell clusters, and the differentiation states and fates of each group of cumulus cells also remained different, which supports the notion that heterogeneity in gene expression is prevalent in single cells. The oxidative phosphorylation pathway was significantly enriched in differentially expressed genes among the cell differentiation branch nodes of cumulus cells and among the differentially expressed genes of cumulus cells from the three genotypes. Combined with the important role of oxidative phosphorylation in the maturation of COCs, we suggest that the oxidative phosphorylation pathway of cumulus cells plays a crucial role in the differentiation process of cumulus cells and the mutation effect of the FecB gene.
分类号:
- 相关文献
作者其他论文 更多>>
-
Microbial Communities in Food Waste in Terms of Methanogenic and Residue Gob Remediation Potentials
作者:Wang, Lizhi;Wang, Lizhi;Liu, Yu;Chen, Congcong;Yang, Yuyan;Cheng, Fei;Xu, Zhilei
关键词:food waste; traditional Chinese festivals; bacterial diversity; archaeal diversity; methanogens
-
Fertilizer application parameters for drip-irrigated peanut based on the fertilizer effect function established from a "3414" field trial
作者:Gao, Zhijian;Liu, Yu;Wang, Guodong;Yang, Guojiang;Liu, Yantao;Wang, Liang;Gao, Zhijian;Liu, Yu;Wang, Guodong;Yang, Guojiang;Gao, Zhijian;Liu, Yu;Wang, Guodong;Yang, Guojiang;Bai, Xinlu;Zhi, Jinhu;Tang, Xiaoyun
关键词:peanut yield; mulched drip irrigation; "3414" field trial; fertilizer effect model; recommended fertilization
-
Estimating Fraction of Absorbed Photosynthetically Active Radiation of Winter Wheat Based on Simulated Sentinel-2 Data under Different Varieties and Water Stress
作者:Sun, Zheng;Sun, Liang;Liu, Yu;Li, Yangwei;Chen, Ruiqing;Wuyun, Deji;Crusiol, Luis Guilherme Teixeira
关键词:fraction of absorbed photosynthetically active radiation; MNDVI; winter wheat; vegetation index; Sentinel-2
-
Diversity of Trichoderma species associated with green mold contaminating substrates of Lentinula edodes and their interaction
作者:Cao, Zi-Jian;Zhao, Juan;Liu, Yu;Wang, Shou-Xian;Qin, Wen-Tao;Cao, Zi-Jian;Zheng, Su-Yue
关键词:Hypocreaceae; Trichoderma; green mold; Lentinula edodes; phylogeny; morphology; taxonomy
-
Detection of polymorphisms in six genes and their association analysis with litter size in sheep
作者:Liu, Kai;Liu, Yufang;Chu, Mingxing;Liu, Yufang;Chu, Mingxing
关键词:Sheep; litter size; single nucleotide polymorphisms; CLSTN2; CTH
-
Subsurface organic amendment of a saline soil increases ecosystem multifunctionality and sunflower yield
作者:Song, Jiashen;Zhang, Hongyuan;Chang, Fangdi;Yu, Ru;Wang, Jing;Li, Yuyi;Chen, Aiping;Xu, Yang;Liu, Yu;Zhou, Jie;Li, Yuyi
关键词:Soil quality; Enzyme activity; Soil ecosystem multifunctionality; Crop yield; Humic acid and manure; Salinization
-
Screening of Litter-Size-Associated SNPs in NOX4, PDE11A and GHR Genes of Sheep
作者:Li, Jiajun;Gong, Yiming;Wang, Xiangyu;He, Xiaoyun;Chu, Mingxing;Di, Ran;He, Xiaolong
关键词:sheep; NOX4; PDE11A; litter size; molecular marker