The complete plastid genome of the wild rice species Oryza brachyantha (Poaceae)
文献类型: 外文期刊
第一作者: Liu, Fengqi
作者: Liu, Fengqi;Han, Guiqing;Guo, Changhong;Liu, Fengqi;Han, Guiqing;Tembrock, Luke R.;Wu, Zhiqiang;Sun, Cheng
作者机构:
关键词: Next generation sequencing;Oryza brachyantha;plastid genome;rice
期刊名称:MITOCHONDRIAL DNA PART B-RESOURCES ( 影响因子:0.658; 五年影响因子:0.674 )
ISSN: 2380-2359
年卷期: 2016 年 1 卷
页码:
收录情况: SCI
摘要: The whole plastid genome of wild rice (Oryza brachyantha) is characterized in this study. The genome is 134 604 bp in length and is arranged in a typical circular structure, including a pair of inverted repeats (IRs) of 20 832 bp in size separated by a large single-copy region (LSC) of 80 411 bp in length and a small single-copy region (SSC) of 12 529 bp in length. The overall GC content of the genome is 38.98%. One hundred and ten unique genes were annotated from the chloroplast genome, including 76 protein-coding genes, 4 ribosomal RNA genes and 30 tRNA genes. A total of 20 of these genes are duplicated in the IR regions, 13 genes contain 1 intron and 2 genes (rps12 and ycf3) have 2 introns.
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