Genetic variation and population structure of the mushroom Pleurotus ferulae in China inferred from nuclear DNA analysis

文献类型： 外文期刊

第一作者： Zhao Meng-ran

作者： Zhao Meng-ran;Huang Chen-yang;Wu Xiang-li;Chen Qiang;Qu Ji-bin;Gao Wei;Zhang Jin-xia;Li Yan-chun

作者机构：

关键词： genetic variation;population structure;genetic differentiation

期刊名称：JOURNAL OF INTEGRATIVE AGRICULTURE （ 影响因子：2.848； 五年影响因子：2.979 ）

ISSN： 2095-3119

年卷期： 2016 年 15 卷 10 期

页码：

收录情况： SCI

摘要： To investigate the genetic diversity of an edible fungus Pleurotus ferulae, a total of 89 wild samples collected from six geographical locations in the Xinjiang Uygur Autonomous Region of China and two geographical locations in Italy, were analyzed using three DNA fragments including the translation elongation factor (EF1 alpha), the second largest subunit of the RNA polymerase II (RPB2) and the largest subunit of the RNA polymerase II (RPB1). The results indicated relatively abundant genetic variability in the wild resources of P. ferulae. The analysis of molecular variance (AMOVA) showed that the vast majority of the genetic variation was found within geographical populations. Both the Chinese populations and the Italian populations of P ferulae displayed a limited genetic differentiation. The degree of differentiation between the Chinese populations and the Italian populations was obviously higher than that between the populations from the same region, and moreover the genetic differentiation among all the tested populations was correlated to the geographical distance. The phylogeny analyses confirmed that samples from China and Italy belonged to another genetic group separated from Pleurotus eryngii. They were closely related to each other but were clustered according to their geographical origins, which implied the Chinese populations were highly differentiated from the Italian populations because of distance isolation, and the two populations from different regions might be still in the process of allopatric divergence.

分类号：

  • 相关文献

[1]Microsatellite markers reveal genetic divergence among wild and cultured populations of Chinese sucker Myxocyprinus asiaticus. Cheng, W. W.,Wang, D. Q.,Wang, C. Y.,Du, H.,Wei, Q. W.,Cheng, W. W.. 2016

[2]Genetic diversity and linkage disequilibrium studies on a 3.1-Mb genomic region of chromosome 3B in European and Asian bread wheat (Triticum aestivum L.) populations. Hao, C. Y.,Perretant, M. R.,Choulet, F.,Wang, L. F.,Paux, E.,Sourdille, P.,Feuillet, C.,Balfourier, Francois,Hao, C. Y.,Wang, L. F.,Zhang, X. Y.,Hao, C. Y.,Wang, L. F.,Zhang, X. Y.,Hao, C. Y.,Wang, L. F.,Zhang, X. Y..

[3]Microsatellite markers reveal genetic diversity of wild soybean in different habitats and implications for conservation strategies (Glycine soja) in China. Wang, Ke-Jing,Li, Xiang-Hu,Yan, Mao-Fen. 2014

[4]Mitochondrial genetic diversity and population structure of a vulnerable freshwater fish, rock carp (Procypris rabaudi) in upper Yangtze River drainage. Zhang, Xiuyue,Yue, Bisong,Song, Zhaobin,Song, Jun,Hou, Feixia,Song, Zhaobin.

[5]Regional-scale differentiation and phylogeography of a desert plant Allium mongolicum (Liliaceae) inferred from chloroplast DNA sequence variation. Zhang, Yinghua,Yu, Qiushi,Hu, Xiaoke,Hu, Jing,Fan, Baoli,Yu, Qiushi,Zhang, Qian.

[6]Population Genetic Analysis of the Rice Stem Borer, Chilo suppressalis, in the South China. Hou Mao-lin,Liu Yu-di,Wu Yu-chun,Liu Gui-qin. 2013

[7]Genetic and fruit trait differences between Chinese elite lines/varieties and American varieties of processing tomato. Liu, Xiaoxi,Zhang, Hongchi,Yang, Wencai,Wang, Liang,Li, Yan.

[8]AFLP analyses of genetic variation of Eupatorium adenophorum (Asteraceae) populations in China. Huang, W. K.,Wan, F. H.,Guo, J. Y.,Peng, D. L.,Huang, W. K.,Gao, B. D.,Xie, B. Y..

[9]Genetic diversity and differentiation of Ankole cattle populations in Uganda inferred from microsatellite data. Kugonza, D. R.,Mpairwe, D.,Kiwuwa, G. H.,Kugonza, D. R.,Jianlin, H.,Okeyo, A. M.,Hanotte, O.,Jianlin, H.,Nabasirye, M..

[10]Genetic Variation and Population Structure of the White Rhinoceros. Hou, Guanyu,Zeng, Hongpu,Wang, Dongjin,Zhou, Hanlin. 2012

[11]Genetic variation and phylogeography of Psammosilene tunicoides (Caryophyllaceae), a narrowly distributed and endemic species in south-western China. Zhang, Qing-Ying,Zhao, Yu-Juan,Gong, Xun,Zhang, Qing-Ying.

[12]Whole genome deep sequencing revealed host impact on population structure, variation and evolution of Rice stripe virus. Lu, Lina,Zhou, Xueping,Wu, Jianxiang,Wu, Sanling,Jiang, Jun,Liang, Jingting,Zhou, Xueping. 2018

[13]Genetic differentiation of Bemisia tabaci (Gennadius) (Hemiptera : Aleyrodidae) biotype Q based on mitochondrial DNA markers. Chu, Dong,Tao, Yun-Li,Liu, Guo-Xia,Fan, Zhong-Xue,Bi, Yu-Ping,Wan, Fang-Hao. 2008

[14]Cytoplasmic diversity of the cotton genus as revealed by chloroplast microsatellite markers. Li, Pengbo,Hua, Jinping,Li, Pengbo,Liu, Huimin,Li, Zhaohu,Hua, Jinping. 2014

[15]Genome-wide analysis of maize NLP transcription factor family revealed the roles in nitrogen response. Ge, Min,Jiang, Lu,Wang, Yuancong,Lv, Yuanda,Zhou, Ling,Liang, Shuaiqiang,Bao, Huabin,Zhao, Han,Liu, Yuhe. 2018

[16]Diversity analysis of the developed qingke (hulless barley) cultivars representing different growing regions of the Qinghai-Tibet Plateau in China using sequence-related amplified polymorphism (SRAP) markers. Liu, Xianjun,Liu, Xinchun,Feng, Zongyun,Yang, Ping,Yang, Wuyun,Yang, Ping,Liu, Xianjun,Liu, Xinchun,Feng, Zongyun. 2010

[17]Selection pressures have driven population differentiation of domesticated and wild common carp (Cyprinus carpio L.). Xu, L. H.,Wang, C. H.,Wang, J.,Ma, Y. Q.,Yang, X. X.,Dong, Z. J.. 2012

[18]Genetic diversity and relationship of Mauremys mutica and M-annamensis assessed by DNA barcoding sequences. Zhao, Jian,Li, Wei,Wen, Ping,Zhang, Dandan,Zhu, Xinping,Zhao, Jian,Wen, Ping. 2016

[19]The loss of genetic diversity during captive breeding of the endangered sculpin, Trachidermus fasciatus, based on ISSR markers: implications for its conservation. Bi Xiaoxiao,Yang Qiaoli,Gao Tianxiang,Li Chuangju. 2011

[20]Genetic differentiation among common and selected hatchery populations of founder: Evidence from RAPD markers. Liu, Yun-Guo,Chen, Song-Lin,Li, Ba-Fang. 2007

作者其他论文 更多>>

微信小程序