Population Genetic Analysis of the Rice Stem Borer, Chilo suppressalis, in the South China

文献类型： 外文期刊

第一作者： Hou Mao-lin

作者： Hou Mao-lin;Liu Yu-di;Wu Yu-chun;Liu Gui-qin

作者机构：

关键词： Chilo suppressalis;microsatellite markers;mtDNA cox1 and cox2 gene;genetic variation;population differentiation;population structure

期刊名称：JOURNAL OF INTEGRATIVE AGRICULTURE （ 影响因子：2.848； 五年影响因子：2.979 ）

ISSN： 2095-3119

年卷期： 2013 年 12 卷 6 期

页码：

收录情况： SCI

摘要： Genetic variation and patterns of genetic differentiation of the rice stem borer, Chilo suppressalis (Lepidoptera: Pyralidae), from the South China were analyzed using 6 microsatellite markers and two partial mtDNA (cox1 and cox2) regions. All of the 6 microsatellite loci were polymorphic in the studied seven populations. The allelic richness per population ranged between 5.67 and 14.00, and average H-E and H-O values were 0.6246-0.8329 and 0.2634-0.6061, respectively. As the mitochondrial genome is a single genetic locus, we only present results for the concatenated data set (cox1 plus cox2 gene sequences, 513 bp). The concatenated data showed high level of genetic diversity and there are 23 variable polymorphic sites among the 513 sites in concatenated data. Nearly all of (20 of 21) pairwise F-ST comparisons among populations showed genetic differentiation with moderate to high pairwise F-ST values based on microsatellite markers. However, for the mtDNA data, most of the seven populations did not show significant differentiation with other populations. The differences of population differentiation obtained with the two different genetic markers could be mainly attributed to the different mutation rates of microsatellite and mtDNA. There was not genetic structure existed in these studied populations based on microsatellite loci and mtDNA data. The analysis based on network, mismatch distribution, Tajima's D and F-S indicated that the studied populations were from the recent same ancestor or the same refuge and followed by a sudden demographic expansion condition.

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