The Genetic Architecture of Flowering Time and Photoperiod Sensitivity in Maize as Revealed by QTL Review and Meta Analysis

文献类型： 外文期刊

第一作者： Xu, Jie

作者： Xu, Jie;Liu, Jian;Cao, Moju;Wang, Jing;Lan, Hai;Lu, Yanli;Pan, Guangtang;Rong, Tingzhao;Liu, Yaxi;Xu, Yunbi;Xu, Yunbi

作者机构：

关键词： Maize;flowering time;photoperiod sensitivity;meta-analysis;consensus quantitative trait loci (cQTL);molecular breeding

期刊名称：JOURNAL OF INTEGRATIVE PLANT BIOLOGY （ 影响因子：7.061； 五年影响因子：6.002 ）

ISSN： 1672-9072

年卷期： 2012 年 54 卷 6 期

页码：

收录情况： SCI

摘要： The control of flowering is not only important for reproduction, but also plays a key role in the processes of domestication and adaptation. To reveal the genetic architecture for flowering time and photoperiod sensitivity, a comprehensive evaluation of the relevant literature was performed and followed by meta analysis. A total of 25 synthetic consensus quantitative trait loci (QTL) and four hot-spot genomic regions were identified for photoperiod sensitivity including 11 genes related to photoperiod response or flower morphogenesis and development. Besides, a comparative analysis of the QTL for flowering time and photoperiod sensitivity highlighted the regions containing shared and unique QTL for the two traits. Candidate genes associated with maize flowering were identified through integrated analysis of the homologous genes for flowering time in plants and the consensus QTL regions for photoperiod sensitivity in maize (Zea mays L.). Our results suggest that the combination of literature review, meta-analysis and homologous blast is an efficient approach to identify new candidate genes and create a global view of the genetic architecture for maize photoperiodic flowering. Sequences of candidate genes can be used to develop molecular markers for various models of marker-assisted selection, such as marker-assisted recurrent selection and genomic selection that can contribute significantly to crop environmental adaptation. [ Yanli Lu (Corresponding author)]

分类号：

  • 相关文献

[1]Days to heading 7, a major quantitative locus determining photoperiod sensitivity and regional adaptation in rice. Gao, He,Jin, Mingna,Zheng, Xiao-Ming,Chen, Jun,Zhang, Zhe,Sheng, Peike,Ma, Jin,Ma, Weiwei,Wang, Haiyang,Wu, Chuanyin,Wan, Jianmin,Gao, He,Zhou, Kunneng,Jiang, Ling,Liu, Shijia,Wan, Jianmin,Yuan, Dingyang,Xin, Yeyun,Deng, Huafeng,Yuan, Longping,Wang, Maoqing,Huang, Dongyi.

[2]Development of a maize 55 K SNP array with improved genome coverage for molecular breeding. Xu, Cheng,Jian, Yinqiao,Guo, Zifeng,Xie, Chuanxiao,Fu, Junjie,Wang, Hongwu,Wang, Guoying,Xu, Yunbi,Zou, Cheng,Ren, Yonghong,Zhang, Yan,Xu, Yunbi,Li, Ping,Li, Ping. 2017

[3]Meta-analysis of constitutive QTLs for disease resistance in maize and its synteny conservation in the rice genome. Zhao, L.,Wang, Q. Y.,Liu, H. J.,Zhang, C. X.,Li, X. H.. 2015

[4]Meta-analysis and candidate gene mining of low-phosphorus tolerance in maize. Zhang, Hongwei,Uddin, Mohammed Shalim,Zou, Cheng,Xie, Chuanxiao,Xu, Yunbi,Li, Wen-Xue,Uddin, Mohammed Shalim,Xu, Yunbi. 2014

[5]Genome-wide introgression lines and their use in genetic and molecular dissection of complex phenotypes in rice (Oryza sativa L.). Li, ZK,Fu, BY,Gao, YM,Xu, JL,Ali, J,Lafitte, HR,Jiang, YZ,Rey, JD,Vijayakumar, CHM,Maghirang, R,Zheng, TQ,Zhu, LH.

[6]Genetic improvement of cotton tolerance to salinity stress. Ma, Xinrong,Dong, Hezhong,Li, Weijiang,Ma, Xinrong. 2011

[7]Development and application of KASP marker for high throughput detection of AhFAD2 mutation in peanut. Zhao, Shuzhen,Li, Aiqin,Li, Changsheng,Xia, Han,Zhao, Chuanzhi,Zhang, Ye,Hou, Lei,Wang, Xingjun. 2017

[8]Achievements and prospects of genomics-assisted breeding in three legume crops of the semi-arid tropics. Varshney, Rajeev K.,Mohan, S. Murali,Gaur, Pooran M.,Pandey, Manish K.,Sawargaonkar, Shrikant L.,Chitikineni, Annapurna,Janila, Pasupuleti,Saxena, K. B.,Sharma, Mamta,Rathore, Abhishek,Mallikarjuna, Nalini,Gowda, C. L. L.,Varshney, Rajeev K.,Varshney, Rajeev K.,Varshney, Rajeev K.,Liang, Xuanqiang,Gangarao, N. V. P. R.,Pandey, Manish K.,Bohra, Abhishek,Pratap, Aditya,Datta, Subhojit,Chaturvedi, S. K.,Nadarajan, N.,Kimurto, Paul K.,Fikre, Asnake,Tripathi, Shailesh,Bharadwaj, Ch.,Anuradha, G.,Babbar, Anita,Choudhary, Arbind K.,Mhase, M. B.,Mannur, D. M.. 2013

[9]Advances in Molecular Breeding Research of Goat Fecundity. Wang, Jian-Ying,Zhang, Xiu-Mei,Lan, Zou-Ran. 2012

[10]Analysis for the Global Patent Competition on Chinese Cabbage Molecular Breeding. Zhao, Jingjuan. 2015

[11]High-throughput development of simple sequence repeat markers for genetic diversity research in Crambe abyssinica. Qi, Weicong,Lin, Feng,Zhao, Han,Liu, Yuhe,Huang, Bangquan,Cheng, Jihua,Zhang, Wei. 2016

[12]Association Analysis of the nced and rab28 Genes with Phenotypic Traits Under Water Stress in Maize. Su, Zhijun,Li, Xinhai,Hao, Zhuanfang,Xie, Chuanxiao,Li, Mingshun,Weng, Jianfeng,Zhang, Degui,Zhang, Shihuang,Su, Zhijun,Li, Xinhai,Hao, Zhuanfang,Xie, Chuanxiao,Li, Mingshun,Weng, Jianfeng,Zhang, Degui,Zhang, Shihuang,Liang, Xiaoling,Su, Zhijun,Wang, Zhigang,Gao, Julin.

[13]A platform for soybean molecular breeding: The utilization of core collections for food security. Qiu, Li-Juan,Xing, Li-Li,Guo, Yong,Wang, Jun,Chang, Ru-Zhen,Jackson, Scott A..

[14]DEVELOPMENT AND CHARACTERIZATION OF 21 EST-DERIVED MICROSATELLITE MARKERS IN VICIA FABA (FAVA BEAN). Ma, Yu,Yang, Tao,Guan, Jianping,Wang, Shumin,Wang, Haifei,Sun, Xuelian,Zong, Xuxiao.

[15]Molecular analysis of an additional case of hybrid sterility in rice (Oryza sativa L.). Zhao, Z. G.,Zhang, Y. H.,Bian, X. F.,Wang, Y.,Jiang, L.,Liu, X.,Chen, L. M.,Liu, S. J.,Zhang, W. W.,Wan, J. M.,Zhu, S. S.,Wan, J. M.,Ikehashi, H..

[16]Genetic and genomic analyses for economically important traits and their applications in molecular breeding of cultured fish. Tong JinGou,Sun XiaoWen. 2015

[17]Breeding to Optimize Agriculture in a Changing World. Wang, Jiankang,Wan, Jianmin,Luis Araus, Jose. 2015

[18]Recent progress on molecular breeding of rice in China. Rao, Yuchun,Li, Yuanyuan,Qian, Qian,Rao, Yuchun. 2014

[19]Study on heterosis of inter-subspecies between indica and japonica rice (Oryza sativa L.) using chromosome segment substitution lines. Yu, CY,Wan, JM,Zhai, HQ,Wang, CM,Jiang, L,Xiao, YH,Liu, YQ.

[20]Whole-genome strategies for marker-assisted plant breeding. Xu, Yunbi,Lu, Yanli,Gao, Shibin,Prasanna, Boddupalli M.. 2012

作者其他论文 更多>>

微信小程序