Molecular characterization of China rabies virus vaccine strain
文献类型: 外文期刊
第一作者: Jiao, Wenqiang
作者: Jiao, Wenqiang;Yin, Xiangping;Li, Zhiyong;Lan, Xi;Li, Xuerui;Tian, Xiaoting;Li, Baoyu;Yang, Bin;Zhang, Yun;Liu, Jixing
作者机构:
关键词: Rabies virus;aG;China;full-length genome
期刊名称:VIROLOGY JOURNAL ( 影响因子:4.099; 五年影响因子:3.719 )
ISSN: 1743-422X
年卷期: 2011 年 8 卷
页码:
收录情况: SCI
摘要: Background: Rabies virus (RV), the agent of rabies, can cause a severe encephalomyelitis in several species of mammals, including humans. As a human rabies vaccine strain employed in China, the genetic knowledge of the aG strain has not been fully studied. The main goal of the present study is to amplify the whole genome of aG strain, and genetic relationships between other vaccine strains and wild strains were analyzed. Results: The entire genome of human rabies virus vaccine strain aG employed in China was sequenced; this is the second rabies virus vaccine strain from China to be fully characterized. The overall organization and the length of the genome were similar to that of other lyssaviruses. The length of aG strain was 11925nt, comprising a leader sequence of 58nt, nucleoprotein (N) gene of 1353nt, phosphoprotein (P) gene of 894 nt, matrix protein (M) gene of 609nt, glycoprotein (G) gene of 1575nt, RNA-dependent RNA polymerase (RdRp,L) gene of 6384nt, and a trailer region of 70 nt. There was TGAAAAAAA (TGA(7)) consensus sequence in the end of each gene, except AGA(7) at the end of G gene. There was AACAYYYCT consensus start signal at the beginning of each gene. Conclusions: In this report, we analyzed the full genome of China human rabies vaccine strain aG. Our studies indicated that the genome of aG retained the basic characteristics of RV. At gene level, N was the most conserved among the five coding genes, indicating this gene is the most appropriate for quantitative genotype definition. The phylogenetic analysis of the N indicated the aG strain clustered most closely with Japanese and Russian rabies vaccine strains, suggesting that they may share the same ancestor; also, the aG strain did not share high homology with wild strains isolated from China, making it may not be the best vaccine strain, more research is needed to elucidate the genetic relationship among the RV circulating in China.
分类号:
- 相关文献
作者其他论文 更多>>
-
Development of Genome-Wide SSR Markers in Leymus chinensis with Genetic Diversity Analysis and DNA Fingerprints
作者:Ou, Taiyou;Wu, Zinian;Tian, Chunyu;Yang, Yanting;Gong, Wenlong;Niu, Jianjiang;Li, Zhiyong;Ou, Taiyou;Wu, Zinian;Tian, Chunyu;Yang, Yanting;Gong, Wenlong;Niu, Jianjiang;Li, Zhiyong
关键词:DNA fingerprint; genetic diversity;
Leymus chinensis ; simple sequence repeat; whole-genome sequencing -
Carbohydrate-based fat mimetics: A focus on fat-mimicking mechanisms and a tribology perspective
作者:Li, Xuerui;Xu, Zhenghang;Xu, Xiaoyun;Zheng, Kai;Pan, Siyi;Wang, Lufeng;Xu, Xiaoyun;Pan, Siyi;Wang, Lufeng;Li, Xuerui;Wang, Hui;Regenstein, Joe M.
关键词:Carbohydrate-based fat mimetic; Elastic-sliding-adhesion; Microparticulate; Three-dimensional network; Tribology
-
Identification and Expression Analysis of NAC Transcription Factors Related to Rust Resistance in Foxtail Millet
作者:Gong, Keke;Liu, Jia;Zhang, Mengya;Dong, Zhiping;Ma, Jifang;Xuan, Peixue;Bai, Hui;Li, Zhiyong;Gong, Keke;Liu, Jia;Zhang, Mengya;Dong, Zhiping;Ma, Jifang;Xuan, Peixue;Bai, Hui;Li, Zhiyong;Gong, Keke;Liu, Jia;Zhang, Mengya;Dong, Zhiping;Ma, Jifang;Xuan, Peixue;Bai, Hui;Li, Zhiyong
关键词:
Setaria italica ; NAC;Uromyces setariae-italicae ; transcription factor; rust disease resistance; qRT-PCR -
Complete mitochondrial genome of Medicago sativa ssp. falcata (Papilionoideae, Fabaceae): characterization and phylogenetic analysis
作者:Ou, Taiyou;Wu, Zinian;Liu, Qian;Tian, Chunyu;Yang, Yanting;Liu, Lemeng;Guo, Maowei;Li, Zhiyong;Ou, Taiyou;Wu, Zinian;Liu, Qian;Tian, Chunyu;Yang, Yanting;Liu, Lemeng;Guo, Maowei;Li, Zhiyong
关键词:
Medicago falcate ; Mitochondrial genome; Gene transfer; RNA editing; Phylogenetic analysis -
Assembly and Comparative Analysis of the Complete Mitochondrial Genome of Bromus inermis
作者:Feng, Sibin;Tian, Chunyu;Yang, Yanting;Gong, Wenlong;Li, Zhiyong;Feng, Sibin;Wu, Zinian;Tian, Chunyu;Yang, Yanting;Gong, Wenlong
关键词:
Bromus inermis ; mitochondrial genome; gene transfer; RNA editing; phylogenetic analysis -
Characterization of the complete chloroplast genome and comparative analysis of the phylogeny and codon usage bias of three Yunnan wild rice species
作者:Li, Rongxin;Wang, Bo;Xiao, Suqin;Chen, Ling;Yin, Fuyou;Li, Jinlu;Jiang, Cong;Zhang, Dunyu;Zhong, Qiaofang;Zhang, Yun;Xing, Jiaxin;Cheng, Zaiquan;Liu, Li;Li, Rongxin;Li, Rongxin;Wang, Bo;Xiao, Suqin;Chen, Ling;Yin, Fuyou;Li, Jinlu;Jiang, Cong;Zhang, Dunyu;Zhong, Qiaofang;Zhang, Yun;Xing, Jiaxin;Cheng, Zaiquan;Liu, Li
关键词:Yunnan wild rice species; chloroplast genome; phylogeny; codon usage bias; mutation pressure; natural selection
-
Characterization of Key Metabolic Markers in Hongqujiu Across Different Aging Years Using Metabolomics
作者:Cai, Yiyang;Huang, Simei;Yang, Bin;Mo, Wenlan;Xiao, Lishi;Huang, Zhiwei;Cai, Yiyang;Yan, Sunan;Huang, Zhiwei;Cai, Yiyang;Huang, Simei;Yang, Bin;Mo, Wenlan;Xiao, Lishi;Huang, Zhiwei;Yan, Sunan;Li, Xiangyou
关键词:Hongqujiu; untargeted metabolomics; volatile compounds; non-volatile compounds; aging years