Single-cell RNA sequencing and UPHLC-MS/MS targeted metabolomics offer new insights into the etiological basis for male cattle-yak sterility
文献类型: 外文期刊
第一作者: Guo, Xian
作者: Guo, Xian
作者机构:
关键词: Cattle-yak; Yak; Single-cell transcriptome; UPHLC-MS/MS; Testis somatic cells
期刊名称:INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES ( 影响因子:8.2; 五年影响因子:7.8 )
ISSN: 0141-8130
年卷期: 2023 年 253 卷
页码:
收录情况: SCI
摘要: The variety of species can be efficiently increased by interspecific hybridization. However, because the males in the hybrid progeny are usually sterile, this heterosis cannot be employed when other cattle and yaks are hybridized. While some system-level studies have sought to explore the etiological basis for male cattle-yak sterility, no systematic cellular analyses of this phenomenon have yet been performed. Here, single-cell RNA sequencing and UPHLC-MS/MS targeted metabolomics methods were used to study the differences in testicular tissue between 4-year-old male yak and 4-year-old male cattle-yak, providing new and comprehensive insights into the causes of male cattle-yak sterility. Cattle-yak testes samples detected 6 somatic cell types and one mixed germ cell type. Comparisons of these cell types revealed the more significant differences in Sertoli cells (SCs) and [Leydig cells and myoid cells (LCs_MCs)] between yak and cattle-yak samples compared to other somatic cell clusters. Even though the LCs and MCs from yaks and cattle-yaks were derived from the differentiation of the same progenitor cells, a high degree of overlap between LCs and MCs was observed in yak samples. Still, only a small overlap between LCs and MCs was observed in cattle-yak samples. Functional enrichment analyses revealed that genes down-regulated in cattle-yak SCs were primarily enriched in biological activity, whereas upregulated genes in these cells were enriched for apoptotic activity. Furthermore, the genes of up-regulated in LCs_MCs of cattle-yak were significantly enriched in enzyme inhibitor and molecular function inhibitor activity. On the other hand, the genes of down-regulated in these cells were enriched for signal receptor binding, molecular function regulation, positive regulation of biological processes, and regulation of cell communication activity. The most significant annotated differences between yak and cattle-yak LCs_MCs were associated with cell-to-cell communication. While yak LCs_MCs regulated spermatogenic cells at spermatogonia, spermatocyte, and spermatid levels, no such relationships were found between cattle-yak LCs_MCs and germ cells. This may suggest that the somatic niche in male cattle-yak testes is a microenvironment that is ultimately not favorable for spermatogenesis.
分类号:
- 相关文献
作者其他论文 更多>>
-
Correlation of Coding and Non-Coding RNAs on the Fat Deposition of Yaks Under Different Feeding Systems
作者:Xiong, Lin;Pei, Jie;Guo, Shaoke;Cao, Mengli;Ding, Zhiqiang;Kang, Yandong;Wu, Xiaoyun;Guo, Xian;Xiong, Lin;Pei, Jie;Guo, Shaoke;Cao, Mengli;Ding, Zhiqiang;Kang, Yandong;Wu, Xiaoyun;Guo, Xian
关键词:yak; fat deposition; regulatory gene; non-coding RNAs; signal pathway
-
Genome-wide scan for selection signatures reveals novel insights into the adaptive capacity characteristics in three Chinese cattle breeds
作者:Wu, Xiaoyun;Pei, Jie;Xiong, Lin;Ge, Qianyun;Bao, Pengjia;Liang, Chunnian;Yan, Ping;Guo, Xian;Yan, Ping;Yan, Ping
关键词:Chinese cattle; Extreme environment; Adaptation; Genome; Selection signature
-
Whole-Genome Sequencing Unveils the Uniqueness of Yushu Yaks (Bos grunniens)
作者:Cai, Bao;Wu, Xiaoyun;Shi, Yilin;Kang, Yandong;Ding, Ziqiang;Guo, Shaoke;Cao, Mengli;Hu, Liyan;Zhang, Ben;Wang, Xingdong;Pei, Jie;Ge, Qianyun;Xiong, Lin;Guo, Xian;Zhang, Songshan
关键词:Yushu yak; whole-genome resequencing; population structure; selection signals
-
Full-length transcriptome sequencing of the longissimus dorsi muscle of yak and cattle-yak using nanopore technology
作者:Cao, Mengli;Ding, Ziqiang;Guo, Shaoke;Kang, Yandong;Hu, Liyan;Zhang, Ben;Pei, Jie;Guo, Xian;Cao, Mengli;Ding, Ziqiang;Guo, Shaoke;Kang, Yandong;Hu, Liyan;Zhang, Ben;Pei, Jie;Guo, Xian;Wang, Xingdong;Ma, Yi
关键词:Yak; Cattle-yak; Longissimus dorsi; Alternative splicing; Full-length transcriptom
-
Comparative Analysis of miRNA Expression Profiles of Yak Milk-Derived Exosomes at Different Altitudes
作者:Ren, Wenwen;La, Yongfu;Ma, Xiaoming;Wu, Xiaoyun;Guo, Xian;Chu, Min;Yan, Ping;Liang, Chunnian;Ren, Wenwen;La, Yongfu;Ma, Xiaoming;Wu, Xiaoyun;Guo, Xian;Chu, Min;Yan, Ping;Liang, Chunnian;Ren, Wenwen;Lan, Xianyong
关键词:yak; milk-derived exosomes; miRNA
-
Integration of bulk and single-cell RNA sequencing reveals dynamic changes in epidermal cells
作者:Zheng, Qingbo;Bao, Pengjia;Wu, Xiaoyun;Zhang, Xiaolan;Huang, Chun;Wang, Tong;Ma, Chaofan;Zhang, Minghao;Chu, Min;Guo, Xian;Liang, Chunnian;Yan, Ping;Zheng, Qingbo;Yan, Ping;Zheng, Qingbo;Yan, Ping;Pan, Heping
关键词:Hair follicle cycle; Single-cell RNA sequencing; Cell-cell adhesion; Stem cell function
-
Characteristic analysis of N6-methyladenine in different parts of yak epididymis
作者:Ding, Ziqiang;Wang, Xingdong;Guo, Shaoke;Kang, Yandong;Cao, Mengli;Hu, Liyan;Zhang, Ben;Xiong, Lin;Pei, Jie;Guo, Xian;Ding, Ziqiang;Wang, Xingdong;Guo, Shaoke;Kang, Yandong;Cao, Mengli;Hu, Liyan;Zhang, Ben;Xiong, Lin;Pei, Jie;Guo, Xian;Yang, Tao
关键词:Epididymis; Reproductive physiology;
N (6)-Methyladenosine; Sperm maturation; Yak