Puccinia striiformis f.sp tritici presents high diversity and recombination in the over-summering zone of Gansu, China

文献类型: 外文期刊

第一作者: Enjalbert, J.

作者: Enjalbert, J.;Duan, X.;Tellier, A.;Wan, A.;Leconte, M.;de Vallavielle-Pope, C.

作者机构:

关键词: effective size;linkage disequilibrium;parasexuality;survival;wheat (stripe) yellow rust

期刊名称:MYCOLOGIA ( 影响因子:2.696; 五年影响因子:3.089 )

ISSN: 0027-5514

年卷期: 2010 年 102 卷 1 期

页码:

收录情况: SCI

摘要: Puccinia striiformis f.sp. tritici (PST), a basidiomycota responsible for wheat yellow rust, has a strict Clonal behavior and a low genetic diversity in European and Australian populations. On the other hand high diversity has been reported in Chinese populations. Moreover it is thought that in China yellow rust. epidemics start recurrently from the western highlands where over-summering Occurs. To compare PST genetic diversity in this area to the one described in France seven AFLP primer combinations were used to analyze a sample of 160 isolates collected in 2001 in five counties of Gansu Province. The AFLP data revealed 40 polymorphic bands, discriminating 139 AFLP genotypes. Linkage disequilibrium and phylogeographic analyses Support the hypothesis of a reproductive mode that is not strictly clonal. In this regard Chinese isolates front Gansu strongly contrast with the European Studies using the same markers. Genetic diversity of this 1 y sampling in Gansu is found to be seven times higher than the one observed in France over 20 y and exhibits lower linkage disequilibrium. The effective Population size of the French sample was estimated to be 1000 times smaller than the Gansu Population. These results support the hypothesis of large population size as well as the occurrence of genetic recombination, while the importance of Gansu as a main over-summering area requires assessment through larger scale studies.

分类号:

  • 相关文献

[1]Genome-wide introgression lines and their use in genetic and molecular dissection of complex phenotypes in rice (Oryza sativa L.). Li, ZK,Fu, BY,Gao, YM,Xu, JL,Ali, J,Lafitte, HR,Jiang, YZ,Rey, JD,Vijayakumar, CHM,Maghirang, R,Zheng, TQ,Zhu, LH.

[2]The dopamine D2 receptor gene polymorphisms associated with chicken broodiness. Xu, H. P.,Shen, X.,Zhou, M.,Luo, C. L.,Kang, L.,Liang, Y.,Zeng, H.,Nie, Q. H.,Zhang, D. X.,Zhang, X. Q.,Zhou, M.,Kang, L.. 2010

[3]Association mapping analysis of fiber yield and quality traits in Upland cotton (Gossypium hirsutum L.). Mulugeta Seyoum Ademe,Du, Xiongming,Jia, Yinhua,Shoupu He,Zhaoe Pan,Junling Sun,Qinglian Wang,Hongde Qin,Jinhai Liu,Hui Liu,Jun Yang,Dongyong Xu,Jinlong Yang,Zhiying Ma,Jinbiao Zhang,Zhikun Li,Zhongmin Cai,Xuelin Zhang,Xin Zhang,Aifen Huang,Xianda Yi,Guanyin Zhou,Lin Li,Haiyong Zhu,Baoyin Pang,Liru Wang,Yinhua Jia,Xiongming Du.

[4]Association Analysis in Rice: From Application to Utilization. Zhang, Peng,Zhong, Kaizhen,Tong, Hanhua,Shahid, Muhammad Qasim. 2016

[5]Development and evaluation of the first high-throughput SNP array for common carp (Cyprinus carpio). Xu, Jian,Zhao, Zixia,Li, Jiongtang,Jiang, Yanliang,Zhang, Yan,Li, Qiang,Zhu, Yuanyuan,Liu, Yuanyuan,Xu, Peng,Sun, Xiaowen,Zhang, Xiaofeng,Zheng, Xianhu,Kuang, Youyi,Sun, Xiaowen,Feng, Jianxin,Li, Chuangju,Yu, Juhua,Xu, Peng. 2014

[6]Association Analysis of the Amino Acid Contents in Rice. Zhao, Weiguo,Chung, Jong-Wook,Park, Yong-Jin,Zhao, Weiguo,Park, Eun-Jin,Chung, Ill-Min,Ahn, Joung-Kuk,Kim, Gwang-Ho,Zhao, Weiguo. 2009

[7]Genetic Diversity, Population Structure, and Linkage Disequilibrium of an Association-Mapping Panel Revealed by Genome-Wide SNP Markers in Sesame. Cui, Chengqi,Mei, Hongxian,Liu, Yanyang,Zhang, Haiyang,Zheng, Yongzhan,Mei, Hongxian,Liu, Yanyang,Zhang, Haiyang,Zheng, Yongzhan,Mei, Hongxian,Liu, Yanyang,Zhang, Haiyang,Zheng, Yongzhan. 2017

[8]Evaluation of the genetic diversity and genome-wide linkage disequilibrium of Chinese maize inbred lines. Wang, Ming,Zhang, Xiaobo,Zheng, Yonglian,Zhao, Jiuran,Song, Wei. 2011

[9]An analysis of population structure and linkage disequilibrium using multilocus data in 187 maize inbred lines (Retracted article. See vol. 28, pg. 135, 2011). Xie, Chuanxiao,Li, Mingshun,Li, Xinhai,Xiao, Muji,Hao, Zhuanfang,Zhang, Shihuang,Warburton, Marilyn,Zhao, Qi. 2008

[10]Estimation of linkage disequilibrium levels and haplotype block structure in Chinese Simmental and Wagyu beef cattle using high-density genotypes. Niu, Hong,Zhu, Bo,Guo, Peng,Zhang, Wengang,Xue, Jinglong,Chen, Yan,Zhang, Lupei,Gao, Huijiang,Gao, Xue,Xu, Lingyang,Li, Junya.

[11]Linkage Disequilibrium Estimation of Chinese Beef Simmental Cattle Using High-density SNP Panels. Zhu, M.,Zhu, B.,Wang, Y. H.,Wu, Y.,Xu, L.,Guo, L. P.,Yuan, Z. R.,Zhang, L. P.,Gao, X.,Gao, H. J.,Xu, S. Z.,Li, J. Y.,Zhu, B..

[12]QTL analysis for resistance to preharvest sprouting in rice (Oryza sativa). Zhang, Y. Z.,Gao, F. Y.,Ren, G. J.,Lu, X. J.,Sun, S. X.,Li, H. J.,Gao, Y. M.,Luo, H.,Yan, W. G..

[13]Genotyping-by-sequencing-based genome-wide association studies on Verticillium wilt resistance in autotetraploid alfalfa (Medicago sativa L.). Yu, Long-Xi,Zhang, Tiejun,Zheng, Ping,Main, Dorrie,Rodringuez, Jonas,Zhang, Tiejun.

[14]A genome-wide survey with different rapeseed ecotypes uncovers footprints of domestication and breeding. Wei, Dayong,Cui, Yixin,He, Yajun,Ding, Yijuan,Li, Jiana,Qian, Wei,Wei, Dayong,Xiong, Qing,Qian, Lunwen,Tong, Chaobo,Lu, Guangyuan,Jung, Christian.

[15]Genome-wide association study reveals the genetic architecture of flowering time in rapeseed (Brassica napus L.). Xu, Liping,Hu, Kaining,Wen, Jing,Yi, Bin,Shen, Jinxiong,Ma, Chaozhi,Tu, Jinxing,Fu, Tingdong,Zhang, Zhenqian,Guan, Chunyun,Chen, Song,Hua, Wei,Li, Jiana.

[16]Development of eighteen polymorphic microsatellite markers in Scylla paramamosain by 5 ' anchored PCR technique. Cui, Haiyu,Ma, Hongyu,Ma, Lingbo,Ma, Chunyan,Ma, Qunqun,Cui, Haiyu,Ma, Qunqun.

[17]Polymorphisms of caprine GDF9 gene and their association with litter size in Jining Grey goats. Feng, T.,Chu, M. X.,Cao, G. L.,Di, R.,Fang, L.,Geng, C. X.,Chen, H. Q.,Lang, X. Z.,Liu, X. L.,Li, N..

[18]Genetic diversity, linkage disequilibrium, and association mapping analyses of peach (Prunus persica) landraces in China. Cao, Ke,Wang, Lirong,Zhu, Gengrui,Fang, Weichao,Chen, Changwen,Luo, Jing. 2012

[19]Estimates of linkage disequilibrium and effective population sizes in Chinese Merino (Xinjiang type) sheep by genome-wide SNPs. Liu, Shudong,He, Sangang,Chen, Lei,Li, Wenrong,Liu, Mingjun,He, Sangang,Chen, Lei,Li, Wenrong,Liu, Mingjun,Di, Jiang.

[20]Two Novel SNPs in HSF1 Gene Are Associated with Thermal Tolerance Traits in Chinese Holstein Cattle. Li, Qiu-Ling,Ju, Zhi-Hua,Huang, Jin-Ming,Li, Jian-Bin,Li, Rong-Ling,Hou, Ming-Hai,Wang, Chang-Fa,Zhong, Ji-Feng.

作者其他论文 更多>>