Association Analysis in Rice: From Application to Utilization

文献类型: 外文期刊

第一作者: Zhang, Peng

作者: Zhang, Peng;Zhong, Kaizhen;Tong, Hanhua;Shahid, Muhammad Qasim

作者机构:

关键词: association analysis;genotyping;linkage disequilibrium;marker density;phenotyping;population structure;Oryza sativa

期刊名称:FRONTIERS IN PLANT SCIENCE ( 影响因子:5.753; 五年影响因子:6.612 )

ISSN: 1664-462X

年卷期: 2016 年 7 卷

页码:

收录情况: SCI

摘要: Association analysis based on linkage disequilibrium (LD) is an efficient way to dissect complex traits and to identify gene functions in rice. Although association analysis is an effective way to construct fine maps for quantitative traits, there are a few issues which need to be addressed. In this review, we will first summarize type, structure, and LD level of populations used for association analysis of rice, and then discuss the genotyping methods and statistical approaches used for association analysis in rice. Moreover, we will review current shortcomings and benefits of association analysis as well as specific types of future research to overcome these shortcomings. Furthermore, we will analyze the reasons for the underutilization of the results within association analysis in rice breeding.

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