Comparative transcriptome analysis of Anguilla japonica livers following exposure to methylene blue
文献类型: 外文期刊
第一作者: Lv, Xin-Mei
作者: Lv, Xin-Mei;Yang, Xian-Le;Xie, Xin-Yan;Yang, Zong-Ying;Hu, Kun;Wu, Ying-Jie;Jiang, Ying-ying;Lv, Xin-Mei;Yang, Xian-Le;Xie, Xin-Yan;Yang, Zong-Ying;Hu, Kun;Wu, Ying-Jie;Jiang, Ying-ying;Lv, Xin-Mei;Yang, Xian-Le;Xie, Xin-Yan;Yang, Zong-Ying;Hu, Kun;Wu, Ying-Jie;Jiang, Ying-ying;Yang, Zong-Ying;Liu, Teng-Fei;Fang, Wen-Hong;Huang, Xuan-Yun
作者机构:
关键词: Anguilla japonica;liver;methylene blue;transcriptome
期刊名称:AQUACULTURE RESEARCH ( 影响因子:2.082; 五年影响因子:2.415 )
ISSN: 1355-557X
年卷期: 2018 年 49 卷 3 期
页码:
收录情况: SCI
摘要: The thiazine dye methylene blue is widely used as a disinfectant and antidote in veterinary medicine. Here, we compared transcriptome differences in the liver of Anguilla japonica exposed to methylene blue using Illumina RNA sequencing technology. A total of 75,953,174 and 86,499,866 clean reads with an average length of 126bp from control and treatment groups respectively. A total of 148,238 transcripts were assembled, with 62,152 components were assembled. Overall, 416,991 unigenes were checked against the National Center of Biotechnology Information, Non-redundant, Cluster of Orthologous Groups (COG), and Kyoto Encyclopedia of Genes and Genomes (KEGG) databases. Of these, 18,541 genes were judged to be differently expressed. The gene ontology (GO) terms molecular function and biological process were the most enriched in protein binding, followed by ATP binding and regulation of transcription, and DNA-dependent. KEGG pathway analysis revealed significant enrichment of N-glycan biosynthesis and the citrate cycle. This study determined that unigenes related to transmembrane transport and drug metabolism in A.japonica were differentially expressed following exposure to methylene blue. These findings can shed insight into the mechanism of methylene blue metabolism in this economically important species.
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