The complete mitochondrial genome sequence and gene organization of Trematomus bernacchii (Perciformes: Nototheniidae) with phylogenetic consideration
文献类型: 外文期刊
第一作者: Song, Wei
作者: Song, Wei;Li, Lingzhi;Huang, Hongliang;Zhao, Mengdi;Jiang, Keji;Zhang, Fengying;Zhao, Ming;Chen, Xuezhong;Ma, Lingbo;Zhao, Mengdi
作者机构:
关键词: Complete mitogenome;genome structure;phylogeny;Trematomus bernacchii
期刊名称:MITOCHONDRIAL DNA PART B-RESOURCES ( 影响因子:0.658; 五年影响因子:0.674 )
ISSN: 2380-2359
年卷期: 2016 年 1 卷
页码:
收录情况: SCI
摘要: In this study, the complete mitochondrial DNA sequence was obtained from Trematomus bernacchii. The full length of mitogenome was 16 018 bp, including 20 transfer RNA genes, a 16S ribosomal RNA genes and an incomplete 12S rRNA, 12 protein-coding genes and an incomplete ND6 protein-coding gene, and 2 non-coding regions: control region (D-loop) and origin of light-strand (L-strand) replication (OL). Most genes were located on the heavy-strand (H-strand), while ND6 and seven tRNA genes were located on the L-strand. T- bernacchii's mitogenome was comprised of 24.52% for A, 25.44% for C, 20.38% for G and 29.66% for T, with a higher A + T content (54.18%). From the NJ phylogenetic tree, it revealed that T. bernacchii's was genetically closest to species Dissostichus eleginoides among seven species within suborder Notothenioidei. This study could lay the foundation for the future studies in species identification, taxonomic status, molecular systematics, stock evaluation and conservation genetics for T. bernacchii's.
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