First genetic linkage map for the mud crab (Scylla paramamosain) constructed using microsatellite and AFLP markers

文献类型： 外文期刊

第一作者： Ma, H. Y.

作者： Ma, H. Y.;Li, S. J.;Feng, N. N.;Ma, C. Y.;Wang, W.;Chen, W.;Ma, L. B.;Ma, H. Y.;Li, S. J.;Feng, N. N.;Ma, C. Y.;Wang, W.;Chen, W.;Ma, L. B.

作者机构：

关键词： Mud crab;Microsatellites;AFLP;Polymorphism;Genetic linkage map

期刊名称：GENETICS AND MOLECULAR RESEARCH （ 影响因子：0.764； 五年影响因子：0.912 ）

ISSN： 1676-5680

年卷期： 2016 年 15 卷 2 期

页码：

收录情况： SCI

摘要： The mud crab (Scylla paramamosain) is of economic importance for the fisheries and aquaculture industry in China. In this study, we constructed the first genetic linkage map for this species using microsatellite and amplified fragment length polymorphism (AFLP) markers. The map consisted of 65 linkage groups, including 34 triplets and 9 doublets. A total of 212 molecular markers were mapped, including 60 microsatellites and 152 AFLP markers. The linkage groups ranged from 7 to 102.5 cM and covered 2746.4 cM in length. The mean length was 42.3 cM per linkage group, and the mean spacing was 18.68 cM. The genome size was estimated to be 5539.62 cM, with 50% coverage by the present map. Moreover, we reported 5 transcriptome-derived polymorphic microsatellite markers and characterized their polymorphism in a first-generation family. This study will facilitate studies on high-density maps and molecular marker-assisted selection in S. paramamosain and related crustacean species.

分类号：

  • 相关文献

[1]Genetic evidence of local adaptation of wheat yellow rust (Puccinia striiformis f. sp tritici) within France. Duan, X,Leconte, M,Hovmoller, MS,De Vallavieille-Pope, C.

[2]Polymorphic microsatellite markers in the guava fruit fly, Bactrocera correcta (Diptera: Tephritidae). Buahom, Nopparat,Li, Zhihong,Du, Yu,Jiang, Xiaolong,Wu, Yi,Deng, Yuliang,Fu, Wei.

[3]Identification and validation of a core set of microsatellite markers for genetic diversity analysis in watermelon, Citrullus lanatus Thunb. Matsum. & Nakai. Zhang, Haiying,Wang, Hui,Guo, Shaogui,Ren, Yi,Gong, Guoyi,Xu, Yong,Weng, Yiqun.

[4]Amplified fragment length polymorphism analysis of Mythimna separata (Lepidoptera : Noctuidae) geographic and melanie laboratory populations in China. Luo, Li-Zhi,Zhang, Lei.

[5]Identification of a trypsin gene from Scylla paramamosain and its expression profiling during larval development. Jiang, Keji,Zhang, Fengying,Zhang, Dan,Zhang, Yong,Qiao, Zhenguo,Ma, Lingbo,Tao, Qichang,Pi, Yan. 2011

[6]Population genetic diversity of mud crab (Scylla paramamosain) in Hainan Island of China based on mitochondrial DNA. Ma, Hongyu,Ma, Chunyan,Ma, Lingbo.

[7]Isolation and Characterization of a Ferritin cDNA from the Mud Crab Scylla paramamosain. Zhang, Dan,Jiang, Keji,Zhang, Fengying,Ma, Chunyan,Shi, Yanhong,Qiao, Zhenguo,Ma, Lingbo,Zhang, Dan.

[8]A novel peroxinectin involved in antiviral and antibacterial immunity of mud crab, Scylla paramamosain. Du, Zhi-Qiang,Ren, Qian,Ren, Qian,Huang, An-Ming,Fang, Wen-Hong,Zhou, Jun-Fang,Gao, Lu-Jiao,Li, Xin-Cang.

[9]Isolation and characterization of gene-derived single nucleotide polymorphism (SNP) markers in Scylla paramamosain. Ma, Hongyu,Ma, Qunqun,Ma, Chunyan,Ma, Lingbo.

[10]A novel myeloid differentiation factor 88 homolog, SpMyD88, exhibiting SpToll-binding activity in the mud crab Scylla paramamosain. Li, Xin-Cang,Zhu, Lei,Li, Lin-Gui,Huang, Yan-Qing,Lu, Jian-Xue,Fang, Wen-Hong,Kang, Wei,Ren, Qian,Ren, Qian.

[11]Constructing a high-density linkage map for Gossypium hirsutum x Gossypium barbadense and identifying QTLs for lint percentage. Yuzhen Shi,Wentan Li,Aiguo Li,Ruihua Ge,Baocai Zhang,Junzhi Li,Guangping Liu,Junwen Li,Aiying Liu,Haihong Shang,Juwu Gong,Wankui Gong,Zemao Yang,Feiyü Tang,Zhi Liu,Weiping Zhu,Jianxiong Jiang,Xiaonan Yu,Tao Wang,Wei Wang,Tingting Chen,Kunbo Wang,Zhengsheng Zhang,Youlu Yuan. 2015

[12]A genetic linkage map and comparative genome analysis of common carp (Cyprinus carpio L.) using microsatellites and SNPs. Zheng, Xianhu,Kuang, Youyi,Zhang, Xiaofeng,Lu, Cuiyun,Cao, Dingchen,Li, Chao,Sun, Xiaowen,Zheng, Xianhu. 2011

[13]NOVEL FLUORESCENT SEQUENCE-RELATED AMPLIFIED POLYMORPHISM (FSRAP) MARKERS FOR THE CONSTRUCTION OF A GENETIC LINKAGE MAP OF WHEAT (Triticum aestivum L.). Zhang, Li,Yu, Yan,Wei, Shuhong,Yang, Jun,Yang, Zaijun,Qu, Jipeng,Peng, Zhengsong,Lu, Lu,Yang, Wuyun. 2017

[14]Genetic Linkage Map Construction and QTL Analysis of Two Interspecific Reproductive Isolation Traits in Sponge Gourd. Wu, Haibin,He, Xiaoli,Gong, Hao,Luo, Shaobo,Li, Mingzhu,Chen, Junqiu,Zhang, Changyuan,Huang, Wangping,Luo, Jianning,Wu, Haibin,Luo, Shaobo,Yu, Ting. 2016

[15]Genetic linkage map construction for kenaf using SRAP, ISSR and RAPD markers. Chen, Mei-xia,Wei, Cheng-lin,Qi, Jian-min,Tao, Ai-fen,Wu, Wei-ren,Chen, Xing-bo,Su, Jian-guang,Li, Ai-Qing. 2011

[16]QTL mapping of bio-energy related traits in Sorghum. Guan, Yan-an,Wang, Hong-gang,Guan, Yan-an,Qin, Ling,Zhang, Hua-wen,Yang, Yan-bing,Li, Ru-yu,Gao, Feng-ju. 2011

[17]A genetic linkage map of common carp (Cyprinus carpio L.) And mapping of a locus associated with cold tolerance. Sun, XW,Liang, LQ. 2004

[18]Cloning and characterization of an S-RNase gene in Camellia sinensis. Zhang, Cheng-Cai,Tan, Li-Qiang,Wang, Li-Yuan,Wei, Kang,Wu, Li-Yun,Zhang, Fen,Cheng, Hao,Zhang, Cheng-Cai,Tan, Li-Qiang,Wang, Li-Yuan,Wei, Kang,Wu, Li-Yun,Zhang, Fen,Cheng, Hao,Zhang, Cheng-Cai,Ni, De-Jiang,Tan, Li-Qiang.

[19]Constructing a new integrated genetic linkage map and mapping quantitative trait loci for vegetative mycelium growth rate in Lentinula edodes. Gong, Wen-Bing,Bian, Yin-Bing,Zhou, Yan,Xiao, Yang,Gong, Wen-Bing,Liu, Wei,Lu, Ying-Ying,Bian, Yin-Bing,Zhou, Yan,Xiao, Yang,Liu, Wei,Lu, Ying-Ying,Kwan, Hoi Shan,Cheung, Man Kit. 2014

[20]A Saturated Genetic Linkage Map of Autotetraploid Alfalfa (Medicago sativa L.) Developed Using Genotyping-by-Sequencing Is Highly Syntenous with the Medicago truncatula Genome. Li, Xuehui,Wei, Yanling,Acharya, Ananta,Jiang, Qingzhen,Kang, Junmei,Brummer, E. Charles,Brummer, E. Charles. 2014

作者其他论文 更多>>

微信小程序