m3C32 tRNA modification controls serine codon-biased mRNA translation, cell cycle, and DNA-damage response

文献类型: 外文期刊

第一作者: Cui, Jia

作者: Cui, Jia;Sendinc, Erdem;Liu, Qi;Kim, Sujin;Fang, Jaden Y.;Gregory, Richard I.;Cui, Jia;Sendinc, Erdem;Liu, Qi;Kim, Sujin;Fang, Jaden Y.;Gregory, Richard I.;Liu, Qi;Liu, Qi;Gregory, Richard I.;Gregory, Richard I.;Gregory, Richard I.

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期刊名称:NATURE COMMUNICATIONS ( 影响因子:14.7; 五年影响因子:16.1 )

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年卷期: 2024 年 15 卷 1 期

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收录情况: SCI

摘要: The epitranscriptome includes a diversity of RNA modifications that influence gene expression. N3-methylcytidine (m(3)C) mainly occurs in the anticodon loop (position C32) of certain tRNAs yet its role is poorly understood. Here, using HAC-Seq, we report comprehensive METTL2A/2B-, METTL6-, and METTL2A/2B/6-dependent m(3)C profiles in human cells. METTL2A/2B modifies tRNA-arginine and tRNA-threonine members, whereas METTL6 modifies the tRNA-serine family. However, decreased m(3)C32 on tRNA-Ser-GCT isodecoders is only observed with combined METTL2A/2B/6 deletion. Ribo-Seq reveals altered translation of genes related to cell cycle and DNA repair pathways in METTL2A/2B/6-deficient cells, and these mRNAs are enriched in AGU codons that require tRNA-Ser-GCT for translation. These results, supported by reporter assays, help explain the observed altered cell cycle, slowed proliferation, and increased cisplatin sensitivity phenotypes of METTL2A/2B/6-deficient cells. Thus, we define METTL2A/2B/6-dependent methylomes and uncover a particular requirement of m(3)C32 tRNA modification for serine codon-biased mRNA translation of cell cycle, and DNA repair genes.

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