Chromosome level genome assembly of oriental armyworm Mythimna separata
文献类型: 外文期刊
第一作者: Xu, Chao
作者: Xu, Chao;Ji, Jichao;Zhu, Xiangzhen;Huangfu, Ningbo;Xue, Hui;Wang, Li;Zhang, Kaixin;Li, Dongyang;Niu, Lin;Chen, Ran;Gao, Xueke;Luo, Junyu;Cui, Jinjie;Xu, Chao;Huangfu, Ningbo;Xue, Hui;Ji, Jichao;Zhu, Xiangzhen;Wang, Li;Zhang, Kaixin;Li, Dongyang;Niu, Lin;Gao, Xueke;Luo, Junyu;Cui, Jinjie;Ji, Jichao;Zhu, Xiangzhen;Wang, Li;Zhang, Kaixin;Li, Dongyang;Niu, Lin;Gao, Xueke;Luo, Junyu;Cui, Jinjie;Chen, Ran
作者机构:
期刊名称:SCIENTIFIC DATA ( 影响因子:9.8; 五年影响因子:10.8 )
ISSN:
年卷期: 2023 年 10 卷 1 期
页码:
收录情况: SCI
摘要: The oriental armyworm, Mythimna separata, is an extremely destructive polyphagous pest with a broad host range that seriously threatens the safety of agricultural production. Here, a high-quality chromosome-level genome was assembled using Illumina, PacBio HiFi long sequencing, and Hi-C scaffolding technologies. The genome size was 706.30 Mb with a contig N50 of 22.08 Mb, and 99.2% of the assembled sequences were anchored to 31 chromosomes. In addition, 20,375 protein-coding genes and 258.68 Mb transposable elements were identified. The chromosome-level genome assembly of M. separata provides a significant genetic resource for future studies of this insect and contributes to the development of management strategies.
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