Development of microsatellite markers and their utilization in genetic diversity analysis of cultivated and wild populations of the mud carp (Cirrhina molitorella)

文献类型： 外文期刊

第一作者： Yang, Cheng

作者： Yang, Cheng;Sun, Xiaowen;Yang, Cheng;Zhu, Xinping

作者机构：

关键词： microsatellite marker;genetic diversity;mud carp;Cirrhina molitorella

期刊名称：JOURNAL OF GENETICS AND GENOMICS （ 影响因子：4.275； 五年影响因子：5.223 ）

ISSN： 1673-8527

年卷期： 2008 年 35 卷 4 期

页码：

收录情况： SCI

摘要： Microsatellite markers have been increasingly used in genetic studies on fishery species because of their high applicability in selective breeding programs. Here we reported the development of microsatellite markers and their utilization in mud carp (Cirrhina molitorella). An (CA)15 enriched library has been constructed for mud carp, using the magnetic beads enrichment procedure. Sequence analysis of 60 randomly picked positive colonies indicate that 56 (93.3%) of the colonies contain microsatellites. Microsatellite polymorphism was assessed using 10 mud carp individuals, and 12 microsatellite loci turned out to be polymorphic. We utilized these loci to study the genetic diversity of a wild population (WM) and a cultured population (CM) of the mud carp. A total of 109 alleles were detected with an average of 9.08 alleles per locus. The mean value of the observed heterozygosity of WM and CM was 0.6361 and 0.6417, respectively, and significant decrease of genetic diversity in CM was not observed. The genetic distance between the two populations was 0.1546 and the value of G(ST) was 0.0473. This showed that there existed a slight genetic differentiation between WM and CM.

分类号：

  • 相关文献

[1]Evaluation of the genetic diversity and population structure of five indigenous and one introduced Chinese goose breeds using microsatellite markers. Li, Jinjun,Yuan, Qingyuan,Shen, Junda,Tao, Zhengrong,Li, Guoqing,Tian, Yong,Wang, Deqian,Chen, Li,Lui, Lizhi. 2012

[2]Genetic characterization of three breeds of high royal jelly producing honeybee (Apis mellifera ligustica) in China. Yin, Ling,Ji, Ting,Chen, Guohong,Peng, Wenjun. 2011

[3]Genetic diversity analysis of oriental river prawn, Macrobrachium nipponense, in Yellow River using microsatellite marker. Qiao, H.,Jiang, S. F.,Sun, M.,Gong, Y. S.,Xiong, Y. W.,Jin, S. B.,Fu, H. T.,Lv, D.. 2013

[4]Evaluation of genetic identity and variation in cultivars of Pyrus pyrifolia (Burm.f.) Nakai from China using microsatellite markers. Cao, Y.,Yang, J.,Zhang, S.,Cao, Y.,Tian, L.,Gao, Y..

[5]Isolation and characterization of polymorphic microsatellite markers from Coilia ectenes. Rong, X. J.,Wang, Q. Y.,Rong, X. J.,Xu, Y. J.,Wang, Q. Y.,Liao, M. J.,Liu, X. Z.,Pan, C. Y.,Zhang, Z.,Wang, Y. G.. 2013

[6]Genetic diversity a population structure analysis of a accessions in the Chinese cowpea [Vigna unguiculata (L.) Walp.] germplasm collection. Chen, Honglin,Hu, Liangliang,Wang, Lixia,Wang, Suhua,Cheng, Xuzhen,Chen, Hong,Wang, Ming Li. 2017

[7]NUCLEAR AND CHLOROPLAST SSR MARKERS IN PAEONIA DELAVAYI (PAEONIACEAE) AND CROSS-SPECIES AMPLIFICATION IN P. LUDLOWII. Zhang, Jin-Mei,Liu, Jing,Sun, Hai-Lu,Yu, Jing,Wang, Jian-Xiu,Zhou, Shi-Liang,Zhang, Jin-Mei,Zhang, Jin-Mei,Liu, Jing,Sun, Hai-Lu,Yu, Jing,Wang, Jian-Xiu. 2011

[8]Genetics driven interventions for ex situ conservation of red junglefowl (Gallus gallus murghi) populations in India. Mukesh,Fernandes, Merwyn,Sathyakumar, Sambandam,Mukesh,Han, Jianlin.

[9]Identification and characterization of microsatellite markers from Musa balbisiana. Feng, Su-ping,Wu, Yao-ting,Wang, Jing-yi,Wang, Jing-yi,Huang, Bing-zhi,Chen, Ye-yuan.

[10]Genetic Diversity of Chinese Indigenous Pig Breeds in Shandong Province Using Microsatellite Markers. Wang, J. Y.,Guo, J. F.,Hu, H. M.,Lin, H. C.,Wang, Cheng,Zhang, Yin,Wu, Y.,Wang, J. Y.,Zhang, Q..

[11]Genetic analysis of Phytophthora sojae populations in Fujian, China. Wu, M.,Li, B.,Liu, P.,Weng, Q.,Chen, Q.,Wu, M.,Zhan, J.,Chen, Q..

[12]The impacts of invasive Nile tilapia (Oreochromis niloticus) on the fisheries in the main rivers of Guangdong Province, China. Gu, Dang En,Ma, Guang Ming,Zhu, Yun Jie,Xu, Meng,Luo, Du,Li, Ying Ying,Wei, Hui,Mu, Xi Dong,Luo, Jian Ren,Hu, Yin Chang,Gu, Dang En,Xu, Meng,Luo, Du,Wei, Hui,Mu, Xi Dong,Luo, Jian Ren,Hu, Yin Chang,Ma, Guang Ming,Zhu, Yun Jie.

[13]Characterization of eleven monosomic alien addition lines added from Gossypium anomalum to Gossypium hirsutum using improved GISH and SSR markers. Wang, Xiaoxiao,Wang, Yingying,Wang, Chen,Chen, Yu,Chen, Yu,Feng, Shouli,Zhao, Ting,Zhou, Baoliang,Chen, Yu. 2016

[14]Inducement and identification of chromosome introgression and translocation of Gossypium australe on Gossypium hirsutum. Wang, Yingying,Feng, Shouli,Li, Sai,Tang, Dong,Chen, Yu,Chen, Yu,Zhou, Baoliang,Chen, Yu,Chen, Yu. 2018

[15]Discovery and characterization of a first set of polymorphic microsatellite markers in Siganus oramin. Liu, Y. -X.,Ma, C. -Y.,Ma, H. -Y.,Feng, C. -L.,Li, S. -J.,Ma, L. -B.,Liu, Y. -X.. 2015

[16]Isolation of novel microsatellite markers from Paralichthys lethostigma (Paralichthyidae) and their cross-species application in Pleuronectiformes. Xu, Y. -J.,Liao, M. -J.,Wang, Y. -G.,Liu, Z. -C.,Qin, P.,Zhang, Z.,Rong, X. -J.,Liu, X. -Z.. 2013

[17]Germplasm of breeding Pseudosciaena crocea as revealed by microsatellite markers. Chang Yumei,Ding Lei,Liang Liqun,Chang Yumei,He Jianguo,Ding Lei,Li Mingyun,Xue Liangyi,Liang Liqun,Lei Qingquan. 2008

[18]Identification of twenty novel polymorphic microsatellite DNA markers from transcripts of the pearl oyster Pinctada fucata using next-generation sequencing approach. Fan, Sigang,Wang, Jingxuan,Huang, Guiju,Liu, Baosuo,Yu, Dahui,Wang, Jingxuan. 2015

[19]Isolation and characterization of novel polymorphic microsatellite markers for Lutjanus erythropterus. Lin, L.,Li, C. H.,Xu, S. N.,Liu, Y.,Xiao, Y. Y.,Lin, L.,Li, C. H.,Xu, S. N.,Liu, Y.,Xiao, Y. Y.. 2015

[20]Molecular tagging of the yellow rust resistance gene Yr10 in common wheat, PI178383 (Triticum aestivum L.). Wang, LF,Ma, JX,Zhou, RH,Wang, XM,Jia, JZ. 2002

作者其他论文 更多>>

微信小程序