Genetic diversity of the self-incompatibility locus in diploid potato

文献类型: 外文期刊

第一作者: Jing, Xinyu

作者: Jing, Xinyu;Jing, Xinyu;Qian, Duoduo;Jiang, Xiuhan;Wang, Pei;Zhu, Yanhui;Zhang, Chunzhi;Qian, Duoduo;Bao, Huihui;Li, Dianjue;Zhu, Guangtao

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关键词: potato; self-incompatibility; S-RNase; SLF

期刊名称:JOURNAL OF INTEGRATIVE AGRICULTURE ( 影响因子:4.4; 五年影响因子:4.8 )

ISSN: 2095-3119

年卷期: 2025 年 24 卷 4 期

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收录情况: SCI

摘要: Re-domestication of diploid potato (Solanum tuberosum) into a seed crop is an innovative breeding method to accelerate genetic improvement. Seed propagation would allow hybrid production and mix superior alleles. However, almost all diploid potatoes in nature are self-incompatible (SI). Gametophytic self-incompatible (GSI) is a widespread SI in Solanaceae and is controlled by the S locus that contains a ribonuclease (S-RNase) and multiple F-box (SLFs); however, the genetic diversity of the S locus in potato is unclear. This study identified 21 S-RNase alleles involved in SI from 194 diploid potato accessions by large-scale transcriptome sequencing. The levels of amino acid similarity among different S-RNase proteins varied from 31.3 to 95.8%. S2 allele is the most widespread in 194 diploid potatoes and is mainly distributed in the S. tuberosum Group Phureja. Based on genomic annotation encoding F-box proteins in the S2 locus on a genomic region of approximately 13 Mb. Comparative genomics analysis showed that eight SLF genes are relatively conserved among four homozygous S locus. The Ka and Ks analysis suggested that S-RNase and intra-haplotypic SLF genes have co-evolved. These findings help select suitable pollinators, combine more hybrid combinations, and fully use heterosis to accelerate diploid potato breeding.

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