Microarray analysis of differentially expressed genes engaged in fruit development between Prunus mume and Prunus armeniaca

文献类型： 外文期刊

第一作者： Li, Xiaoying

作者： Li, Xiaoying;Korir, Nicholas Kibet;Shangguan, Lingfei;Han, Jian;Fang, Jinggui;Wang, Yuzhu;Liu, Lili;Chen, Ming

作者机构：

关键词： Prunus mume;Prunus armeniaca;Fruit;Microarray;Differentially expressed genes

期刊名称：JOURNAL OF PLANT PHYSIOLOGY （ 影响因子：3.549； 五年影响因子：4.164 ）

ISSN： 0176-1617

年卷期： 2012 年 169 卷 17 期

页码：

收录情况： SCI

摘要： Microarray analysis is a technique that can be employed to provide expression profiles of single genes and new insights to elucidate the biological mechanisms responsible for fruit development. To evaluate expression of genes mostly engaged in fruit development between Prunus mume and Prunus armeniaca, we first identified differentially expressed transcripts along the entire fruit life cycle by using microarrays spotted with 10,641 ESTs collected from P. mume and other Prunus EST sequences. A total of 1418 ESTs were selected after quality control of microarray spots and analysis for differential gene expression patterns during fruit development of P. mume and P. Armeniaca. From these, 707 up-regulated and 711 down-regulated genes showing more than two-fold differences in expression level were annotated by GO based on biological processes, molecular functions and cellular components. These differentially expressed genes were found to be involved in several important pathways of carbohydrate, galactose, and starch and sucrose metabolism as well as in biosynthesis of other secondary metabolites via KEGG. This could provide detailed information on the fruit quality differences during development and ripening of these two species. With the results obtained, we provide a practical database for comprehensive understanding of molecular events during fruit development and also lay a theoretical foundation for the cloning of genes regulating in a series of important rate-limiting enzymes involved in vital metabolic pathways during fruit development. (C) 2012 Elsevier GmbH. All rights reserved.

分类号：

  • 相关文献

[1]Evidence of pre-zygotic reproductive isolation between Prunus armeniaca and Prunus mume. Li, X.,Shangguan, L.,Korir, N. K.,Wang, C.,Song, C.,Fang, J.,Wang, Y.,Zhang, J.. 2011

[2]Microarray analysis of differentially expressed genes engaged in fruit development between table and wine grape. Kayesh, Emrul,Han, Jian,Wang, Chen,Song, Changnian,Fang, Jinggui,Wang, Xicheng,Liu, Chonghuai,Ge, Anjing.

[3]A comparative transcriptome analysis of two sets of backcross inbred lines differing in lint-yield derived from a Gossypium hirsutum x Gossypium barbadense population. Wu Man,Liyuan Zhang,Xihua Li,Xiaobing Xie,Wenfeng Pei,Jiwen Yu,Shuxun Yu,Jinfa Zhang. 2016

[4]Transcriptional Differences in Embryonic Fibroblasts Between Beijing Fatty Chicken and Silkie Bantam Using Microarray. WenboLi,WeijunGuan,Ma, Yue Hui,WenboLi,SijiuYu,Zhang, Jiyang,Li, Mansheng.

[5]Microarray Analysis of Genes Involved with Shell Strength in Layer Shell Gland at the Early Stage of Active Calcification. Liu, Zhangguo,Liu, Zhangguo,Zheng, Qi,Zhang, Xueyu,Lu, Lizhi. 2013

[6]Transcriptional differences in embryonic fibroblasts between silkie bantam and Da Gu chicken using microarray. Li, Wenbo,Guan, Weijun,Ma, Yue Hui,Li, Wenbo,Yu, Sijiu,Zhang, Jiyang,Li, Mansheng.

[7]Transcriptional differences in embryonic fibroblasts between beijing fatty chicken and Da Gu chicken using microarray. Li, Wenbo,Guan, Weijun,Ma, Yue Hui,Li, Wenbo,Yu, Sijiu,Zhang, Jiyang,Li, Mansheng.

[8]The role of miR319a and its target gene TCP4 in the regulation of pistil development in Prunus mume. Wang, Wanxu,Shi, Ting,Ni, Xiaopeng,Xu, Yanshuai,Qu, Shenchun,Gao, Zhihong,Wang, Wanxu. 2018

[9]Identification of self-incompatibility (S-) genotypes of Chinese apricot cultivars. Zhang, Lijie,Chen, Xuesen,Chen, Xiaoliu,Zhang, Chunyu,Liu, Xiaoli,Ci, Zhijuan,Zhang, Hong,Wu, Chuanjin,Liu, Chongqi,Zhang, Lijie. 2008

[10]A chemical-inducible Cre-LoxP system allows for elimination of selection marker genes in transgenic apricot. Petri, Cesar,Lopez-Noguera, Sonia,Wang, Hong,Garcia-Almodovar, Carlos,Alburquerque, Nuria,Burgos, Lorenzo,Wang, Hong.

[11]Simultaneous Quantitation of Organic Acids and Monosaccharides by High-Performance Liquid Chromatography. Lu Xin,Song Guohui,Huang Jinian,Li Ruihong,Hagiwara, Shoji,Nabetani, Hiroshi. 2015

[12]Principles and Applications of Hyperspectral Imaging Technique in Quality and Safety Inspection of Fruits and Vegetables. Zhang Bao-hua,Zhang Bao-hua,Li Jiang-bo,Fan Shu-xiang,Huang Wen-qian,Zhang Chi,Wang Qing-yan,Xiao Guang-dong. 2014

[13]Effects of Citric Acid Treatments on the Postharvest Fruit Quality of Ziziphus jujuba Mill. 'Linyilizao'. Zhao, Z. H.,Liu, M. J.,Liu, P.,Liu, X. Y.,Dai, L.,Yang, L.,Tian, S. L.. 2009

[14]Variations in contents of (-)-epicatechin and activities of phenylalanine ammonialyase and polyphenol oxidase of longan fruit during development. Yu, Chunyan,Sun, Jian,Yang, Bao,Jiang, Yueming,Xiang, Xu. 2010

[15]GC-MS Analysis of Volatile Components in Chinese Wild Strawberry (F. nilgerrensis Schlecht.). Zhao, M. Z.,Wang, J.,Wang, Z. W.,Qian, Y. M.,Wu, W. M..

[16]Radiochromic film dosimetry for UV-C treatments of apple fruit. Yan, Ruixiang,Yun, Juan,Fan, Xuetong,Yun, Juan.

[17]Morphological, cytological and fertility consequences of a spontaneous tetraploid of the diploid pear (Pyrus pyrifolia Nakai) cultivar 'Cuiguan'. Wang, Xiaoqing,Shi, Chunhui,Zhang, Xueying,Duan, Ke,Luo, Jun,Wang, Xiaoqing,Shi, Chunhui,Zhang, Xueying,Duan, Ke,Luo, Jun,Wang, Haihai.

[18]Genomic organization and expression analysis of a farnesyl diphosphate synthase gene (FPPS2) in apples (Malus domestica Borkh.). Yuan, Kejun,Wang, Changjun,Xin, Li,Zhang, Anning,Ai, Chengxiang.

[19]Morphological Diversity in Native Apricot Germplasm Resources of China and Grading Standards for the Foliar and Fruit Traits. Sun Haoyuan,Zhang Junhuan,Wang Yuzhu,Jiang Fengchao. 2011

[20]Cloning and characterization of CaGID1s and CaGAI in Capsicum annuum L.. Cao Ya-cong,Sul Xiao-lei,Zhang Zhen-xian,Cao Ya-cong,Zhang Zheng-hai,Wang Li-hao,Zhang Bao-xi. 2016

作者其他论文 更多>>

微信小程序