Development of EST-SSR markers related to disease resistance and their application in genetic diversity and evolution analysis in Gossypium

文献类型： 外文期刊

第一作者： Wang, B. H.

作者： Wang, B. H.;Rong, P.;Cai, X. X.;Zhu, X. Y.;Chen, C. J.;Xu, Y. Y.;Huang, X. J.;Zhuang, Z. M.;Wang, C. B.;Wang, C. B.;Wang, W.

作者机构：

关键词： Disease resistance;Evolution;Gossypium;Expressed sequence tag-simple sequence repeat;Genetic diversity

期刊名称：GENETICS AND MOLECULAR RESEARCH （ 影响因子：0.764； 五年影响因子：0.912 ）

ISSN： 1676-5680

年卷期： 2015 年 14 卷 3 期

页码：

收录情况： SCI

摘要： Cotton (Gossypium spp) is one of the most economically important crops that provide the world's most widely used natural fiber. Diseases such as Fusarium wilt and particularly Verticillium wilt seriously affect cotton production, and thus breeding for disease resistance is one of the most important goals of cotton breeding programs. Currently, potential exists to improve disease resistance in cultivated cotton. Increasing the understanding of the distribution, structure, and organization of genes or quantitative trait loci for disease resistance will help the breeders improve crop yield even in the event of disease. To facilitate the mapping of disease-resistance quantitative trait loci to achieve disease-resistant molecular breeding in cotton, it is necessary to develop polymorphic molecular markers. The objective of this study was to develop simple sequence repeat markers based on cotton expressed sequence tags for disease resistance. The efficacy of these simple sequence repeat markers, their polymorphisms, and cross-species transferability were evaluated. Their value was further investigated based on genetic diversity and evolution analysis. In this study, the unique sequences used to develop markers were compared with the G. arboretum and G. raimondii genome sequences to investigate their position, homology, and collinearity between G. arboretum and G. raimondii.

分类号：

  • 相关文献

[1]Development of EST-SSR markers related to salt tolerance and their application in genetic diversity and evolution analysis in Gossypium. B.H. Wang,P. Zhu,Y.L. Yuan,C.B. Wang,C.M. Yu,H.H. Zhang,X.Y. Zhu,W. Wang,C.B. Yao,Z.M. Zhuang,P. Li. 2014

[2]Genetic diversity and linkage disequilibrium studies on a 3.1-Mb genomic region of chromosome 3B in European and Asian bread wheat (Triticum aestivum L.) populations. Hao, C. Y.,Perretant, M. R.,Choulet, F.,Wang, L. F.,Paux, E.,Sourdille, P.,Feuillet, C.,Balfourier, Francois,Hao, C. Y.,Wang, L. F.,Zhang, X. Y.,Hao, C. Y.,Wang, L. F.,Zhang, X. Y.,Hao, C. Y.,Wang, L. F.,Zhang, X. Y..

[3]Synthetic hexaploid wheat and its utilization for wheat genetic improvement in China. Li, Jun,Wei, Huiting,Hu, Xiaorong,Zou, Yuchun,Liu, Dengcai,Zhang, Lianquan,Zheng, Youliang,He, Zhouhu,He, Zhouhu,Liu, Dengcai. 2009

[4]De novo transcriptome sequencing of Agropyron cristatum to identify available gene resources for the enhancement of wheat. Zhang, Jinpeng,Liu, Weihua,Han, Haiming,Song, Liqiang,Bai, Li,Gao, Zhihui,Zhang, Yan,Yang, Xinming,Li, Xiuquan,Gao, Ainong,Li, Lihui.

[5]Genetic variability assessed by microsatellites in the breeding populations of the shrimp Penaeus (Fenneropenaeus) chinensis in China. Zhang, Tianshi,Kong, Jie,Wang, Weiji,Wang, Qingyin,Zhang, Tianshi.

[6]Genetic diversity within Oryza rufipogon germplasms preserved in Chinese field gene banks of wild rice as revealed by microsatellite markers. Zhang, Chi-Hong,Li, Dao-Yuan,Pan, Da-Jian,Jia, Ji-Zeng,Dong, Yu-Shen.

[7]Genetic diversity in oil and vegetable mustard (Brassica juncea) landraces revealed by SRAP markers. Wu, Xiao-ming,Song, Yunchun,Wu, Xiao-ming,Chen, Bi-yun,Lu, Guangyuan,Wang, Han-zhong,Xu, Kun,Gao Guizhan.

[8]Two maternal origins of Chinese domestic goose. Li, H. F.,Zhu, W. Q.,Chen, K. W.,Song, W.. 2011

[9]Molecular footprints of domestication and improvement in soybean revealed by whole genome re-sequencing. Li, Ying-hui,Yan, Long,Qi, Xiao-tian,Zhang, Le,Chang, Ru-zhen,Guo, Yong,Wang, Xiao-bo,Guan, Rong-xia,Liu, Yu-lin,Jin, Long-guo,Liu, Zhang-xiong,Zhang, Li-juan,Wang, Ke-jing,Qiu, Li-juan,Zhao, Shan-cen,Li, Dong,Li, Jun,Guo, Xiao-sen,He, Wei-ming,Liang, Qin-si,Ye, Chen,Tao, Yong,Wang, Jun-yi,Zhang, Xiu-qing,Chen, Jie,Nielsen, Rasmus,Li, Rui-qiang,Wang, Jian,Wang, Jun,Ma, Jian-xin,Yan, Long,Zhang, Meng-chen,Tao, Yong,Nielsen, Rasmus,Wang, Jun,Wang, Jun-yi,Nielsen, Rasmus,Nielsen, Rasmus,Chen, Peng-yin,Li, Wen-bin,Reif, Jochen C.,Purugganan, Michael,Purugganan, Michael. 2013

[10]Gene duplication, transfer, and evolution in the chloroplast genome. Xiong, Ai-Sheng,Peng, Ri-He,Zhuang, Jing,Gao, Feng,Zhu, Bo,Fu, Xiao-Yan,Xue, Yong,Jin, Xiao-Feng,Tian, Yong-Sheng,Zhao, Wei,Yao, Quan-Hong.

[11]QTL mapping for fiber quality traits across multiple generations and environments in upland cotton. Fu-Ding Sun,Jian-Hong Zhang,Shu-Fang Wang,Wan-Kui Gong,Yu-Zhen Shi,Ai-Ying Liu,Jun-Wen Li,Ju-Wu Gong,Hai-Hong Shang,You-Lu Yuan.

[12]Genome-Wide Analysis of the Sus Gene Family in Cotton. Changsong Zou,Cairui Lu,Haihong Shang,Xinrui Jing,Hailiang Cheng,Youping Zhang,Guoli Song. 2013

[13]Molecular characterization of a transcriptionally active Ty1/copia-like retrotransposon in Gossypium. Yuefen Cao,Yurong Jiang,Mingquan Ding,Shae He,Hua Zhang,Lifeng Lin,Junkang Rong.

[14]Characterization and development of chloroplast microsatellite markers for Gossypium hirsutum, and cross-species amplification in other Gossypium species. Cai, X. Y.,Liu, F.,Zhou, Z. L.,Wang, X. X.,Wang, C. Y.,Wang, Y. H.,Wang, K. B.. 2015

[15]Mapping QTLs for drought tolerance in an F-2:3 population from an inter-specific cross between Gossypium tomentosum and Gossypium hirsutum. J.Y. Zheng,G. Oluoch,M.K. Riaz Khan,X.X. Wang,X.Y. Cai,Z.L. Zhou,C.Y. Wang,Y.H. Wang,X.Y. Li,F. Liu,K.B. Wang. 2016

[16]Genome-wide characterization and comparative analysis of the MLO gene family in cotton. Xiaoyan Wang,Qifeng Ma,Lingling Dou,Zhen Liu,Renhai Peng,Shuxun Yu. 2016

[17]A Gossypium BAC clone contains key repeat components distinguishing sub-genome of allotetraploidy cottons. Yuling Liu,Renhai Peng,Fang Liu,Xingxing Wang,Xinglei Cui,Zhongli Zhou,Chunying Wang,Xiaoyan Cai,Yuhong Wang,Zhongxu Lin,Kunbo Wang. 2016

[18]Induction of cotton ovule culture fibre branching by co-expression of cotton BTL, cotton SIM, and Arabidopsis STI genes. Gaskin Wang,Hongjie Feng,Junling Sun,Xiongming Du. 2013

[19]Cytoplasmic diversity of the cotton genus as revealed by chloroplast microsatellite markers. Li, Pengbo,Hua, Jinping,Li, Pengbo,Liu, Huimin,Li, Zhaohu,Hua, Jinping. 2014

[20]Rapid evolutionary divergence of diploid and allotetraploid Gossypium mitochondrial genomes. Chen, Zhiwen,Nie, Hushuai,Pei, Haili,Li, Shuangshuang,Hua, Jinping,Wang, Yumei,Zhang, Lida. 2017

作者其他论文 更多>>

微信小程序