Proteomic Analysis of Chicken Skeletal Muscle during Embryonic Development

文献类型： 外文期刊

第一作者： Ouyang, Hongjia

作者： Ouyang, Hongjia;Wang, Zhijun;Chen, Xiaolan;Yu, Jiao;Li, Zhenhui;Nie, Qinghua;Ouyang, Hongjia;Wang, Zhijun;Chen, Xiaolan;Yu, Jiao;Li, Zhenhui;Nie, Qinghua;Ouyang, Hongjia;Wang, Zhijun;Chen, Xiaolan;Yu, Jiao;Li, Zhenhui;Nie, Qinghua

作者机构：

关键词： proteome;chicken;skeletal muscle;embryonic development;iTRAQ

期刊名称：FRONTIERS IN PHYSIOLOGY （ 影响因子：4.566； 五年影响因子：4.804 ）

ISSN： 1664-042X

年卷期： 2017 年 8 卷

页码：

收录情况： SCI

摘要： Embryonic growth and development of skeletal muscle is a major determinant of muscle mass, and has a significant effect on meat production in chicken. To assess the protein expression profiles during embryonic skeletal muscle development, we performed a proteomics analysis using isobaric tags for relative and absolute quantification (iTRAQ) in leg muscle tissues of female Xinghua chicken at embryonic age (E) 11, E16, and 1-day post hatch (D1). We identified 3,240 proteins in chicken embryonic muscle and 491 of them were differentially expressed (fold change >= 1.5 or <= 0.666 and p < 0.05). There were 19 up- and 32 down-regulated proteins in Eli vs. E16 group, 238 up- and 227 down-regulated proteins in Eli vs. D1 group, and 13 up- and 5 down-regulated proteins in E16 vs. D1 group. Protein interaction network analyses indicated that these differentially expressed proteins were mainly involved in the pathway of protein synthesis, muscle contraction, and oxidative phosphorylation. Integrative analysis of proteome and our previous transcriptome data found 189 differentially expressed proteins that correlated with their mRNA level. The interactions between these proteins were also involved in muscle contraction and oxidative phosphorylation pathways. The IncRNA-protein interaction network found four proteins DMD, MYL3, TNNI2, and TNNT3 that are all involved in muscle contraction and may be IncRNA regulated. These results provide several candidate genes for further investigation into the molecular mechanisms of chicken embryonic muscle development, and enable us to better understanding their regulation networks and biochemical pathways.

分类号：

  • 相关文献

[1]Circular RNAs are abundant and dynamically expressed during embryonic muscle development in chickens. Ouyang, Hongjia,Chen, Xiaolan,Wang, Zhijun,Yu, Jiao,Jia, Xinzheng,Li, Zhenhui,Luo, Wei,Abdalla, Bahareldin Ali,Jebessa, Endashaw,Nie, Qinghua,Zhang, Xiquan,Ouyang, Hongjia,Chen, Xiaolan,Wang, Zhijun,Yu, Jiao,Jia, Xinzheng,Li, Zhenhui,Luo, Wei,Abdalla, Bahareldin Ali,Jebessa, Endashaw,Nie, Qinghua,Zhang, Xiquan,Ouyang, Hongjia,Chen, Xiaolan,Wang, Zhijun,Yu, Jiao,Jia, Xinzheng,Li, Zhenhui,Luo, Wei,Abdalla, Bahareldin Ali,Jebessa, Endashaw,Nie, Qinghua,Zhang, Xiquan. 2018

[2]Copy Number Variation in SOX6 Contributes to Chicken Muscle Development. Lin, Shudai,Lin, Xiran,Zhang, Zihao,Jiang, Mingya,Nie, Qinghua,Zhang, Xiquan,Rao, Yousheng. 2018

[3]Differentiation of expression profiles of two calcineurin subunit genes in chicken skeletal muscles during early postnatal growth depending on anatomical location of muscles and breed. Shan Yan-ju,Xu Wen-juan,Shu Jing-ting,Zhang Ming,Song Wei-tao,Tao Zhi-yun,Zhu Chun-hong,Li Hui-fang. 2016

[4]iTRAQ-Based Comparative Proteomic Analysis of Seedling Leaves of Two Upland Cotton Genotypes Differing in Salt Tolerance. Wenfang Gong,Feifei Xu,Du, Xiongming,Junling Sun,Zhen Peng,Shoupu He,Zhaoe Pan,Xiongming Du. 2017

[5]iTRAQ-Based Quantitative Proteomic Analysis of the Potentiated and Dormant Antler Stem Cells. Dong, Zhen,Ba, Hengxing,Zhang, Wei,Li, Chunyi,Dong, Zhen,Ba, Hengxing,Zhang, Wei,Li, Chunyi,Coates, Dawn. 2016

[6]iTRAQ-based quantitative proteomics analysis of rice leaves infected by Rice stripe virus reveals several proteins involved in symptom formation. Hajano, Jamal-U-Ddin,Wang, Xifeng,Ren, Yingdang,Lu, Chuantao. 2015

[7]Complementary transcriptomic and proteomic analyses of a chlorophyll-deficient tea plant cultivar reveal multiple metabolic pathway changes. Wang, Lu,Cao, Hongli,Yue, Chuan,Hao, Xinyuan,Yang, Yajun,Wang, Xinchao,Wang, Lu,Cao, Hongli,Yue, Chuan,Hao, Xinyuan,Yang, Yajun,Wang, Xinchao,Chen, Changsong.

[8]iTRAQ-based analysis of developmental dynamics in the soybean leaf proteome reveals pathways associated with leaf photosynthetic rate. Qin, Jun,Wang, Fengmin,Zhang, Mengchen,Xu, Jin,Zhang, Jianan,Liu, Duan,Yin, Changcheng,Chen, Hao,Chen, Pengyin,Qin, Jun,Ma, Jinbing,Zhang, Bo.

[9]iTRAQ-based quantitative proteomic analysis of midgut in silkworm infected with Bombyx mori cytoplasmic polyhedrosis virus. Gao, Kun,Deng, Xiang-Yuan,Shang, Meng-Ke,Qin, Guang-Xing,Hou, Cheng-Xiang,Guo, Xi-Jie.

[10]Comparative proteomic analyses provide novel insights into the effects of grafting wound and hetero-grafting per se on bottle gourd. Wang, Lingping,Li, Guojing,Wu, Xiaohua,Xu, Pei,Li, Guojing,Xu, Pei.

[11]CIDE gene expression in adipose tissue, liver, and skeletal muscle from obese and lean pigs. Qiu, Yue-qin,Yang, Xue-fen,Ma, Xian-yong,Xiong, Yun-xia,Tian, Zhi-mei,Fan, Qiu-li,Wang, Li,Jiang, Zong-yong. 2017

[12]BmARM-Like Protein from Silkworm, Bombyx mori (Lepidoptera) is Putatively Involved in Response against BmNPV Infection. Wang, Xue-yang,Zhang, Shang-zhi,Yu, Dong,Ma, Yan,Fei, Dong-qiong,Yu, Hai-zhong,Xu, Jia-ping,Liu, Ming-hui. 2017

[13]Wnt antagonist, secreted frizzled-related protein 1, is involved in prenatal skeletal muscle development and is a target of miRNA-1/206 in pigs. Yang, Yalan,Sun, Wei,Wang, Ruiqi,Zhou, Rong,Tang, Zhonglin,Li, Kui,Yang, Yalan,Tang, Zhonglin,Li, Kui,Sun, Wei,Lei, Chuzhao. 2015

[14]TIP60 contributes to porcine embryonic development by regulating DNA damage response. Guo, Jing,Zhou, Wenjun,Niu, Ying-Jie,Shin, Kyung-Tae,Kim, Nam-Hyung,Cui, Xiang-Shun,Guo, Jing,Heo, Young Tae. 2018

[15]Envelope surface ultrastructure and specific gravity of artificially fertilized Pacific cod Gadus macrocephalus eggs. Bian, X.,Jin, X.,Wan, R.,Zhang, X.,Gao, T.,Sakurai, Y.,Yamamoto, J.. 2014

[16]Identification and comparison of microRNAs from skeletal muscle and adipose tissues from two porcine breeds. Li, Hong-Yi,Xi, Qian-Yun,Liu, Xiao-Long,Cheng, Xiao,Shu, Gang,Wang, Song-Bo,Wang, Li-Na,Gao, Ping,Zhu, Xiao-Tong,Jiang, Qing-Yan,Zhang, Yong-Liang,Xiong, Yuan-Yan,Yuan, Li. 2012

[17]Identifying suitable reference genes for gene expression analysis in developing skeletal muscle in pigs. Niu, Guanglin,Yang, Yalan,Zhang, YuanYuan,Hua, Chaoju,Wang, Zishuai,Tang, Zhonglin,Li, Kui,Niu, Guanglin,Yang, Yalan,Tang, Zhonglin,Li, Kui. 2016

[18]Activation of mammalian target of rapamycin signaling in skeletal muscle of neonatal chicks: Effects of dietary leucine and age. Deng, Huiling,Zheng, Aijuan,Liu, Guohua,Chang, Wenhuan,Zhang, Shu,Cai, Huiyi. 2014

[19]Transcriptome analysis of gene expression patterns during embryonic development in golden cuttlefish (Sepia esculenta). Bian, Li,Liu, Changlin,Chen, Siqing,Zhao, Fazhen,Ge, Jianlong,Tan, Jie. 2018

[20]Loss-of-function myostatin mutation increases insulin sensitivity and browning of white fat in Meishan pigs. Cai, Chunbo,Qian, Lili,Jiang, Shengwang,Wang, Qingqing,Ma, Dezun,Xiao, Gaojun,Li, Biao,Xie, Shanshan,Gao, Ting,Cui, Wentao,Li, Kui,Cai, Chunbo,Qian, Lili,An, Xiaorong,Gao, Ting,Chen, Yaoxing,Sun, Youde,Liu, Jie. 2017

作者其他论文 更多>>

微信小程序