Complete genome analysis of a novel recombinant isolate of pepper veinal mottle virus from mainland China
文献类型： 外文期刊
第一作者： Zheng, Limin
作者： Zheng, Limin;Peng, Jing;Zhou, Xuguo;Zhang, Deyong;Liu, Yong;Liu, Jian;Zhang, Deyong;Liu, Yong;Zhang, Songbai;Zhao, Zibing;Yan, Fei;Li, Fan;Xie, Yan;Cheng, Zhaobang
作者机构：
期刊名称：VIROLOGY JOURNAL （ 影响因子：4.099； 五年影响因子：3.719 ）
ISSN： 1743-422X
年卷期： 2015 年 12 卷
页码：
收录情况： SCI
摘要： Background: Pepper veinal mottle virus (PVMV) was well established in Africa, and also reported infecting pepper (Capsicum annuum L) in Taiwan and India. However, there is not available of PVMV in mainland China. Here, the first complete genome sequence of PVMV isolated from pepper in mainland China was reported. Finding: The complete genomic sequence of isolate PVMV-HN isolated from pepper in mainland China is reported in this study. The genome of PVMV-HN is 9793 nucleotides (nt) excluding the poly (A) tail, shares 98-99 % nucleotide sequence identity with those two PVMV isolates from Ghana and Taiwan. Recombinant analysis showed that PVMV-HN probably represents a novel recombinant of PVMV. The phylogenetic relationship of PVMV-HN isolate to other PVMV isolates and other potyviruses based on genome or polyprotein sequence level and CP gene level, was also analyzed in this study. Conclusion: The current study will help to understand phylogenetic relationship of isolate PVMV-HN.
分类号：
- 相关文献
作者其他论文 更多>>
-
Mining neural connectivity via spatiotemporal features of neural calcium activity data
作者：Yuan, Ye;Du, Yuheng;Wen, Wentao;Liu, Jian;Xin, Kuankuan;Liu, Hongjiang;Li, Zhaoyu;Zhang, Amin;Yang, Shiyan;Fang, Tao
关键词：C. elegans; Connectome reconstruction; Graph neural networks; Long short-term memory networks; Whole-brain calcium imaging
-
Geographical distribution and genetic analysis reveal recent global invasion of whitefly, Bemisia tabaci, primarily associated with only three haplotypes
作者：Peng, Jing;Lv, Xiao-Lu;Peng, Jing;Ran, Xiao-Tong;Qiu, Bao-Li;Jindal, Vikas;Banta, Geetika;Gupta, Virash K.;Mohindru, Bharathi;Kumar, Vivek;Osborne, Lance S.;Wu, Qing-Jun;Mckenzie, Cindy L.;Ahmed, Muhammad Z.
关键词：
Bemisia tabaci ; China; cryptic species; haplotypes; India; origin -
A highly efficient callus model to study gene functions: HbSRPP1 may play a role in the elongation of cis-1,4-polyisoprene in the rubber tree
作者：Tan, Deguan;Guo, Zihan;Fu, Lili;Yu, Ying;Peng, Jing;Huang, Yuchun;Zhou, Xue;Sun, Xuepiao;Zhang, Jiaming;Tan, Deguan;Guo, Zihan;Zhang, Jiaming;Tan, Deguan;Peng, Jing;Huang, Yuchun;Zhou, Xue;Zhang, Jiaming
关键词：Rubber tree; Callus model; Laticifer cell; Rubber biosynthesis; Function study; Laticifer-specific promoter; HbSRPP1
-
Effects of Paclobutrazol Seed Soaking on Non-Structural Carbohydrate and Grain Enrichment in Direct-Seeded Rice
作者：Zhang, Qiang;Gai, Dongsheng;Liu, Yong;Liu, Weiyang;Fu, Pengcheng;Shao, Xiwen;Geng, Yanqiu;Guo, Liying;Liang, Xuanhe
关键词：Paclobutrazol; direct-seeded rice; soluble sugar; starch; yield
-
Characterization of rhizosphere bacterial communities in oilseed rape cultivars with different susceptibility to Plasmodiophora brassicae infection
作者：Deng, Yue;Huang, Xiaoqing;Yang, Xiaoxiang;Yu, Yaoyin;Zhang, Zhongmei;Hu, Zijin;Zhou, Xiquan;Liu, Yong;Zhang, Lei;Deng, Yue;Wu, Wenxian;Huang, Xiaoqing;Yang, Xiaoxiang;Yu, Yaoyin;Zhang, Zhongmei;Liu, Yong;Zhang, Lei;Zhou, Kang;Zhou, Kang
关键词：rhizosphere microbiome;
Plasmodiophora brassicae ; susceptible cultivar; resistant cultivar; microbial metabolism; nitrogen cycle -
Application of the European Non-native Species in Aquaculture Risk Analysis Scheme to evaluate Micropterus nigricans in China
作者：Li, Shan;Li, Fan;Li, Shan;Li, Fan;Wei, Hui;Gu, Dangen;Wei, Hui;Gu, Dangen;Wei, Hui;Gu, Dangen;Kang, Bin;Xu, Dongpo;Xu, Xiaojun;Stauffer, Jay R.;Stauffer, Jay R.
关键词：aquacultural species; risk assessment; freshwater fish; AS-ISK; ENSARS
-
Investigating the compensatory effect of legume reseeding on soil organic carbon loss under tillage management in a saline-alkali grassland in the semi-arid region
作者：Gao, Yang;Zhang, Yuqi;Liu, Jian;An, Yu;Ma, Hongyuan;Tong, Shouzheng
关键词：Carbon sequestration; Compensatory effect; Growth dynamics; Soil properties; Vegetation restoration
