In silico analysis of gene content in tomato genomic regions mapped to the Ty-2 resistance gene

文献类型： 外文期刊

第一作者： Liu, Y. F.

作者： Liu, Y. F.;Wan, H. J.;Wei, Y. P.;Wang, R. Q.;Ruan, M. Y.;Ye, Q. J.;Li, Z. M.;Zhou, G. Z.;Yao, Z. P.;Yang, Y. J.

作者机构：

关键词： Disease resistance;Expressed sequence tag;Tomato;Ty-2;Tomato yellow leaf curl virus

期刊名称：GENETICS AND MOLECULAR RESEARCH （ 影响因子：0.764； 五年影响因子：0.912 ）

ISSN： 1676-5680

年卷期： 2015 年 14 卷 3 期

页码：

收录情况： SCI

摘要： Tomato yellow leaf curl virus is one of the main diseases affecting tomato production worldwide. Previous studies have shown that Ty-2 is an important resistance gene located between molecular markers C2_At2g28250 (82.3 cM) and T0302 (89.0 cM), and exhibits strong resistance to tomato yellow leaf curl virus in Asia. In this study, Ty-2 candidate genes were subjected to bioinformatic analysis for the sequenced tomato genome. We identified 69 genes between molecular markers C2_At2g28250 and T0302, 22 of which were disease-related resistant genes, including nucleotide binding site-leucine-rich repeat disease resistance genes, protease genes (protein kinase, kinase receptor, and protein isomerase), cytochromes, and transcription factors. Expressed sequence tag analysis revealed that 77.3% (17/22) of candidate disease-resistance genes were expressed, involving 143 expressed sequence tags. Based on full-length cDNA sequence analysis, 7 candidate genes were found, 4 of which were involved in tomato responses to pathogens. Microarray expression analysis also showed that most candidate genes were involved in the tomato responses to multiple pathogens, including fungi, viruses, and bacteria. RNA-seq expression analysis revealed that all candidate genes participated in tomato growth and development.

分类号：

  • 相关文献

[1]Establishment and Application of Ty-2 Molecular Marker in Tomatoes. Yang, Ruixing,Li, Haitao,Lv, Shuwen,Li, Haitao,Chai, Min. 2012

[2]Different effects of exogenous jasmonic acid on preference and performance of viruliferous Bemisia tabaci B and Q. Liu, Yong,Shi, Xiaobin,Pan, Huipeng,Xie, Wen,Wang, Shaoli,Wu, Qingjun,Chen, Gong,Tian, Lixia,Zhang, Youjun,Zhou, Xuguo. 2017

[3]Defense responses in tomato fruit induced by oligandrin against Botrytis cinerea. Wang, Ai-ying,Lou, Bing-gan,Xu, Tong,Lin, Chai,Wang, Ai-ying. 2011

[4]A novel antimicrobial protein isolated from potato (Solanum tuberosum) shares homology with an acid phosphatase. Yuan, FH,Gao, Y,Liang, CG,Xu, J,Zhang, CL,He, LY.

[5]Characterization and function of Tomato yellow leaf curl virus-derived small RNAs generated in tolerant and susceptible tomato varieties. Bai Miao,Yang Guo-shun,Chen Wen-ting,Lin Run-mao,Ling Jiang,Mao Zhen-chuan,Xie Bing-yang. 2016

[6]Elevated O-3 and TYLCV Infection Reduce the Suitability of Tomato as a Host for the Whitefly Bemisia tabaci. Cui, Hongying,Zhang, Youjun,Cui, Hongying,Sun, Yucheng,Ge, Feng,Chen, Fajun. 2016

[7]Genome-wide identification of Dicer-like, Argonaute and RNA-dependent RNA polymerase gene families and their expression analyses in response to viral infection and abiotic stresses in Solanum lycopersicum. Mao, Zhen-Chuan,Kang, Hou-Xiang,Chen, Guo-Hua,Yang, Yu-Hong,Xie, Bing-Yan,Bai, Miao,Yang, Guo-Shun,Chen, Wen-Ting.

[8]Eugenol enhances the resistance of tomato against tomato yellow leaf curl virus. Wang, Chunmei,Fan, Yongjian,Wang, Chunmei.

[9]Virus-Infected Plants Altered the Host Selection of Encarsia formosa, a Parasitoid of Whiteflies. Liu, Xin,Zhang, Youjun,Xie, Wen,Wu, Qingjun,Wang, Shaoli,Chen, Gong. 2017

[10]Control of Tomato yellow leaf curl virus disease by Enterobacter asburiae BQ9 as a result of priming plant resistance in tomatoes. Li, Hongwei,Ding, Xueling,Wang, Chao,Ke, Hongjiao,Wu, Zhou,Liu, Hongxia,Guo, Jianhua,Li, Hongwei,Wang, Chao,Ke, Hongjiao,Wu, Zhou,Liu, Hongxia,Guo, Jianhua,Ding, Xueling,Wang, Yunpeng. 2016

[11]Assessment of the genetic diversity of tomato yellow leaf curl virus. Wan, H. J.,Wang, R. Q.,Ye, Q. J.,Ruan, M. Y.,Li, Z. M.,Zhou, G. Z.,Yao, Z. P.,Yang, Y. J.,Yuan, W.. 2015

[12]Manipulation of Host Quality and Defense by a Plant Virus Improves Performance of Whitefly Vectors. Su, Qi,Zhou, Xiao Mao,Su, Qi,Xie, Wen,Liu, Bai Ming,Wang, Shao Li,Wu, Qing Jun,Zhang, You Jun,Preisser, Evan L..

[13]A SCAR Marker for Detection Resistant Gene Ty-3 in Tomato. Li Haitao,Liu Wenqi,Li Haitao,Zou Qingdao,Zhang Zijun. 2012

[14]Tomato yellow leaf curl virus differentially influences plant defence responses to a vector and a non-vector herbivore. Su, Qi,Wang, Wenkai,Su, Qi,Wang, Shaoli,Chen, Gong,Xie, Wen,Wu, Qingjun,Zhang, Youjun,Mescher, Mark C..

[15]Tomato Yellow Leaf Curl Virus V2 Interacts with Host Histone Deacetylase 6 To Suppress Methylation-Mediated Transcriptional Gene Silencing in Plants. Wang, Bi,Wang, Yaqin,Xie, Yan,Zhou, Xueping,Wang, Bi,Yang, Xiuling,Zhou, Xueping. 2018

[16]Molecular characterization of the genomic region harboring the BYDV-resistance gene Bdv2 in wheat. Xin, Z.,Zhang, Z.,Gao, L.,Ma, Q.,Liu, Y.. 2009

[17]Development and validation of 89 novel expressed sequence tag-derived microsatellite markers in blood clam, Tegillarca granosa. Teng, Shuangshuang,Fang, Jun,Cai, Yilong,Chai, Xueliang,Xiao, Guoqiang,Teng, Shuangshuang,Fang, Jun,Cai, Yilong,Chai, Xueliang,Xiao, Guoqiang,Teng, Shuangshuang,Fang, Jun,Cai, Yilong,Chai, Xueliang,Xiao, Guoqiang. 2017

[18]Analysis of simple sequence repeats markers derived from Phytophthora sojae expressed sequencetags. Zhu, ZD,Huo, YL,Wang, XM,Huang, JB,Wu, XF. 2004

[19]Characterization of 28 polymorphic SSR loci from Meretrix lamarkii Deshayes. Liu, Bo,Teng, Shuang-shuang,Chai, Xue-Liang,Shao, Yan-Qing,Xiao, Guo-Qiang,Fang, Jun,Zhang, Jiong-ming,Liu, Bo,Teng, Shuang-shuang,Chai, Xue-Liang,Shao, Yan-Qing,Xiao, Guo-Qiang,Fang, Jun,Zhang, Jiong-ming,Liu, Bo. 2014

[20]Development of EST-PCR markers for Thinopyrum intermedium chromosome 2Ai#2 and their application in characterization of novel wheat-grass recombinants. Wang, M. J.,Zhang, Y.,Lin, Z. S.,Ye, X. G.,Xin, Z. Y.,Wang, M. J.,Yuan, Y. P.,Zhang, Y.,Ma, W..

作者其他论文 更多>>

微信小程序