High quality draft genome sequence of the slightly halophilic bacterium Halomonas zhanjiangensis type strain JSM 078169(T) (DSM 21076(T)) from a sea urchin in southern China

文献类型： 外文期刊

第一作者： Zhou, Yu

作者： Zhou, Yu;Li, Wen-Jun;Zhou, Yu;Li, Wen-Jun;Zhou, Yu;Li, Rui;Zhou, Yu;Li, Rui;Gao, Xiao-Yang;Li, Wen-Jun;Gao, Xiao-Yang;Lapidus, Alla;Lapidus, Alla;Han, James;Haynes, Matthew;Lobos, Elizabeth;Huntemann, Marcel;Pati, Amrita;Ivanova, Natalia N.;Mavromatis, Konstantinos;Woyke, Tanja;Kyrpides, Nikos C.;Rohde, Manfred;Tindall, Brian J.;Klenk, Hans-Peter;Markowitz, Victor;Kyrpides, Nikos C.

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关键词： strictly aerobic;motile Gram-negative;chemoorganotrophic;slightly halophilic;Halomonadaceae

期刊名称：STANDARDS IN GENOMIC SCIENCES （ 影响因子：1.339； 五年影响因子：1.656 ）

ISSN： 1944-3277

年卷期： 2014 年 9 卷 3 期

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收录情况： SCI

摘要： Halomonas zhanjiangensis Chen et al. 2009 is a member of the genus Halomonas, family Halomonadaceae, class Gammaproteobacteria. Representatives of the genus Halomonas are a group of halophilic bacteria often isolated from salty environments. The type strain H. zhanjiangensis JSM 078169(T) was isolated from a sea urchin (Hemicentrotus pulcherrimus) collected from the South China Sea. The genome of strain JSM 078169 T is the fourteenth sequenced genome in the genus Halomonas and the fifteenth in the family Halomonadaceae. The other thirteen genomes from the genus Halomonas are H. halocynthiae, H. venusta, H. alkaliphila, H. lutea, H. anticariensis, H. jeotgali, H. titanicae, H. desiderata, H. smyrnensis, H. salifodinae, H. boliviensis, H. elongata and H stevensii. Here, we describe the features of strain JSM 078169(T), together with the complete genome sequence and annotation from a culture of DSM 21076(T). The 4,060,520 bp long draft genome consists of 17 scaffolds with the 3,659 protein-coding and 80 RNA genes and is a part of Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG) project.

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[1]Draft genome sequence of Halomonas lutea strain YIM 91125(T) (DSM 23508(T)) isolated from the alkaline Lake Ebinur in Northwest China. Gao, Xiao-Yang,Li, Wen-Jun,Zhi, Xiao-Yang,Li, Hong-Wei,Li, Wen-Jun,Zhi, Xiao-Yang,Li, Hong-Wei,Li, Wen-Jun,Lapidus, Alla,Lapidus, Alla,Han, James,Haynes, Matthew,Lobos, Elizabeth,Huntemann, Marcel,Pati, Amrita,Ivanova, Natalia N.,Mavromatis, Konstantinos,Woyke, Tanja,Kyrpides, Nikos C.,Markowitz, Victor,Tindall, Brian J.,Klenk, Hans-Peter,Kyrpides, Nikos C.,Li, Hong-Wei,Zhou, Yu,Gao, Xiao-Yang,Klenk, Hans-Peter. 2015

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